DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and ctrip

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001189170.1 Gene:ctrip / 40596 FlyBaseID:FBgn0260794 Length:3140 Species:Drosophila melanogaster


Alignment Length:1115 Identity:218/1115 - (19%)
Similarity:330/1115 - (29%) Gaps:441/1115 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   138 KDGPSSGNPLA---------IVGPSGDVRGPSEDDSSEDSLPEGWEERRTDNGRVYYVNHATKST 193
            |.|....:|||         :|...|.:|..|:|||.||         ..||.....::.|:   
  Fly  2261 KGGTVKIDPLAMVQAIERYLVVRGYGGIRADSDDDSEED---------MDDNVAAVVLSQAS--- 2313

  Fly   194 QWDRPRQPGVVGSSHATSPQQRHNTHNGNSGDRQAPAGPTRSTTCTNLMNNGHRSRDLSVTASDE 258
                                .||.. ....||...|..          |......:..|...|::
  Fly  2314 --------------------FRHKL-QFTIGDHVLPYN----------MTVYQAVKQFSPLVSEQ 2347

  Fly   259 RRHSTEILSSVG------KENTSPTTPVSATTTPGKKTSSSNSSSAGGRTLEQRPTNEPATPTSS 317
            .....|..:.:|      :::|....||....|.|....:::|||:....::::        .||
  Fly  2348 PETDNESETLLGNASIWVQQHTIHYRPVEEEVTSGAAAGAASSSSSCSSGVQKQ--------QSS 2404

  Fly   318 TTSASVRLHSNDNHVKTPKHQTNGHAPPESTPTSPTGQQNYVNGNAQNGSTSGNGSGQAAQPQSA 382
            ::|||                                  :.||..:...|:||..||..:..:.|
  Fly  2405 SSSAS----------------------------------SCVNATSSCSSSSGVASGGGSLTKKA 2435

  Fly   383 SNG-----------WTQEDAATTTS---PSTTTSPP----------------------------- 404
            ...           |.:..|....|   |..::|.|                             
  Fly  2436 HKSSSKFMRKKTELWHEGIAPVVISALKPFLSSSLPADVVTVQDASLDALCMLRVIHALNRHWDH 2500

  Fly   405 ------RHSQSPPTPNISPPASVTPSANGNVHSPNA----------------------------- 434
                  |.:..|.:..|.|  .:...||..:..|..                             
  Fly  2501 LYGCVVRQNIIPQSDFIHP--KIMAKANRQLQDPLVIMTGNLPQWLPQIGMACPFLFPFETRHLL 2563

  Fly   435 ----------------NSTPAGSGGGSRSYTAATPGQRSQRRSSR----QQGEE----------- 468
                            ::||..:...| |...|....|.:|..||    :|.|.           
  Fly  2564 FYATSFDRDRALQRLLDTTPDLNAAES-SERVAPRLDRRKRAISRTEILKQAEHILQDFGHSKAL 2627

  Fly   469 -----------------------SSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAAR 510
                                   |:..:|:..|..||..|         .:..|..|....:|..
  Fly  2628 LEIQYENEVGTGLGPTLEFYALVSAELQRTDLGLWNGSDS---------YKQNSVTIVDVVKANS 2683

  Fly   511 PFLDLPPGYEMRTTQQ------GQVYFYHIPTGVST-----WHDPRIPRDFDTQHLTLDAIGPLP 564
            ..|.:....|..||.|      |........|..:|     .|.|  .|.....|:.....|..|
  Fly  2684 AVLHIEDALEATTTDQNTPAVAGASLVSSSTTTTTTTAQQHQHPP--TRSSSRSHVLRSGAGQQP 2746

  Fly   565 SGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPA----PPSATP 625
                           |:|::.:....:..|:..|.|..        |..|:..||    |.|.|.
  Fly  2747 ---------------VEHSSSSAGANENALNMVIAQQF--------SDTNSANPAAIDNPSSTTT 2788

  Fly   626 ATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALRT 690
            ||     .|....|..:|::..|.||||:..|.:     .||..    ||      :||...|  
  Fly  2789 AT-----TVVQHNTTTNNSSIITTTTTTSYVHAV-----HGLFP----LP------LGKSSKL-- 2831

  Fly   691 ELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLS 755
                  ||                    :.|.:||                              
  Fly  2832 ------PQ--------------------MTKAKAK------------------------------ 2840

  Fly   756 REMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQ 820
                                                |.|:|:.:..||.....||..|:.|||:.
  Fly  2841 ------------------------------------FKFLGKFMAKAVMDSRMLDLPFSLPFYRW 2869

  Fly   821 LLNK--PITLGDIEGVDP----------DLHRSLTWMLESNISGIIESTFSVENNSFGALVV--- 870
            |:::  .|.|.|:..|.|          ||.|...::|.......:|.|..:|........:   
  Fly  2870 LVSEEHSIGLADLMRVAPEVQNTLVRLQDLVRQREYILSDPNIDAMEKTEKIEQLDLDGCPIADL 2934

  Fly   871 --------H---ELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLR 924
                    |   ||..||...|||..|..:|:.|...:..:.|:::||.||::||..:.|...||
  Fly  2935 GLDFVLPGHANIELCRGGRDTPVTVHNLHQYISLVTYWFLIEGVQKQFEALREGFDSVFPIQRLR 2999

  Fly   925 PFDERELELVIGGISSIDVND-W-----RNNTRLKHCTNETTQVL-WFWQVVESYSSEMRARLLQ 982
            .|...|||.|..|..|...:. |     :.:.|..|..::.:|.: :.::::.||:.:.:...||
  Fly  3000 MFYPEELECVFCGSGSEQQHSRWEIKMLQESCRTDHGFHQDSQAIQYLYEILASYNRDEQRAFLQ 3064

  Fly   983 FVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADV---PTQNLPKAHTCFNRIDLPPYETYQLL 1044
            |||||.|:|..||:||.       |.|..:..|.|.   |...||...||.|.:.||.|.:.:::
  Fly  3065 FVTGSPRLPTGGFKALT-------PPLTIVRKTLDENQNPNDYLPSVMTCVNYLKLPDYSSREVM 3122

  Fly  1045 CDKLTQAVEE 1054
            ..||..|..|
  Fly  3123 RQKLKVAANE 3132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809 3/28 (11%)
WW 514..546 CDD:197736 9/42 (21%)
WW 562..594 CDD:197736 3/31 (10%)
HECTc 702..1058 CDD:238033 91/389 (23%)
HECTc 726..1058 CDD:214523 88/365 (24%)
ctripNP_001189170.1 Extensin_2 <688..731 CDD:252669
WWE 1409..1481 CDD:128922
FAM199X <1985..2074 CDD:292442
HECTc <2818..3138 CDD:294058 100/426 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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