DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Nedd4

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_648993.1 Gene:Nedd4 / 39958 FlyBaseID:FBgn0259174 Length:1007 Species:Drosophila melanogaster


Alignment Length:1131 Identity:363/1131 - (32%)
Similarity:516/1131 - (45%) Gaps:260/1131 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PRR---------NGTHKVRITILCARNLARKDLFRLPDPFAKVQ---VDGTGQVYS--TEISKSS 57
            |||         :..| :||.:|..::||:||:|...||:.::.   ::|...:.|  |:..|.:
  Fly    56 PRRSLAAVNDSGDSCH-LRIVVLTGQSLAKKDIFGASDPYVRIDLNTINGDINIDSVLTKTKKKT 119

  Fly    58 LDPKWNAHYDLFLGIGD-AITITVWNQRKIHKGSGFLGCVRIPAFNI---QSLKGAGFQRLDL-G 117
            |:|.||..:...:...: .:...|:::.::.: ..|||.|.:...|:   |..:..|.|...| .
  Fly   120 LNPTWNEEFIFRVKPSEHKLVFQVFDENRLTR-DDFLGMVELTLVNLPTEQEGRTIGEQSYTLRP 183

  Fly   118 KLSPDDDELVRGQI------IISLLSKDGPSSGNPLAIVGPSGDVRGPSEDDSS----------E 166
            :.|......::|.:      |.....:..|||||.   .|....|...:..::|          .
  Fly   184 RRSVGAKSRIKGTLRIYHAFIRETREQSEPSSGNS---DGEWEHVEATNAGETSAQPHPFPTGGH 245

  Fly   167 DSLPEGWEERRTDNGRVYYVNHATKSTQWDRPRQPGVVGSSHATSPQQRHNTHNGNSGDRQAPAG 231
            |:||.|||||:..|||.|||||..::||||||.   |:            |:|:..|.|.|    
  Fly   246 DALPAGWEERQDANGRTYYVNHTARTTQWDRPT---VL------------NSHSSQSTDDQ---- 291

  Fly   232 PTRSTTCTNLMNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPT----TPVSATTTPGKKTSS 292
                     |.::..|...:||..::..|.:..|..:..::|.:..    ||.:|.|:.....:.
  Fly   292 ---------LASDFQRRFHISVDDTESGRSADSISHNSIEDNNNAAGLAYTPKTAATSSAPPNTP 347

  Fly   293 SNSSSAGGRTLEQRPTNEPATPTSSTTSASVRLHSNDNHVKTPKHQTNGHAPPESTPTSPTGQQN 357
            :|::....:...|....|...||...||...      |.::.|.    .|..||.:.||      
  Fly   348 TNNNGILAQIAMQYRAEEDQDPTVDHTSFVY------NSLRHPV----AHRQPEISATS------ 396

  Fly   358 YVNGNAQNGSTSGNGSGQAAQPQSASNGWTQEDAATTTSPSTTTSPPRHSQSPPTPNISPPASVT 422
                                         .|.|          ..|.|  ::|..|:|:.....|
  Fly   397 -----------------------------LQND----------LRPVR--EAPGVPDIAITNPFT 420

  Fly   423 PSANGNVHSPNANSTPAGSGGGS----RSYTAATPGQRSQRRSSRQQGE-----ESSTRRRSSRG 478
            ..|.||:         ||..|..    |........|..||:..:||..     :...:....||
  Fly   421 RRAAGNM---------AGGAGWQQERRRQQMQLHIQQHQQRQQQQQQNRILLDVDHRQQEPQHRG 476

  Fly   479 TR--------NGGTSGGGGGGGSGQRYASAAIAAAN----QAARPFLD---------LPPGYEMR 522
            .|        |..|........|.   .||.....|    .||.|.::         |||.:.|:
  Fly   477 QRHQQQHRPSNEDTDHTDSHNPSD---ISAPSTRRNSEEDNAAVPPMEQNTGGEEEPLPPRWSMQ 538

  Fly   523 TTQQGQVYFYHIPTGVSTWHDPR----IPRDFDTQHLTLDAIGPLPSGWEQRKTASGRVYFVDHN 583
            ....|:.:|....:..:||.|||    .|....|:.:. |.:||||.|||:|....|||:::|||
  Fly   539 VAPNGRTFFIDHASRRTTWIDPRNGRASPMPNQTRRVE-DDLGPLPEGWEERVHTDGRVFYIDHN 602

  Fly   584 NRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPAPPSATPATPSAAAAVPPQATPASNATPTT 648
            .||||:.|||||                               .|:.|.    ||.|        
  Fly   603 TRTTQWEDPRLS-------------------------------NPNIAG----QAVP-------- 624

  Fly   649 LTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALRTELQTMQPQSGHCRLEVSRNEIFE 713
                                        |.||...|....::.::..........:.:.|..|.|
  Fly   625 ----------------------------YSRDYKQKYEYFKSHIRKPTNVPNKFEIRIRRTSILE 661

  Fly   714 ESYRLIMKMRAKDMRK-RLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQ 777
            :|||:|..:...|:.| :|.|:|:||.||||||:||||.:|||:||.||.||||:||..|:||||
  Fly   662 DSYRIISSVTKTDLLKTKLWVEFEGETGLDYGGLAREWFYLLSKEMFNPYYGLFEYSAMDNYTLQ 726

  Fly   778 INPDSGV-NPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRS 841
            ||..||: |.:|||||.|:||..|:||:||..||..|..||||.:|.|||.|.|:|.||.:.:.|
  Fly   727 INNGSGLCNEEHLSYFKFIGRIAGMAVYHGKLLDAFFIRPFYKMMLQKPIDLKDMESVDTEYYNS 791

  Fly   842 LTWMLESNISGIIESTFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQ 906
            |.|:.| |...|:|.||.::.:.||....||||||||:|.||.|||.||:||.:.:||:..:::|
  Fly   792 LMWIKE-NDPRILELTFCLDEDVFGQKSQHELKPGGANIDVTNENKDEYIKLVIEWRFVARVKEQ 855

  Fly   907 FLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLK---HCTNETTQVLWFWQV 968
            ..:...||..:||.:|::.|||.||||::.||.:|||.|||.||..|   |..:...|  |||:.
  Fly   856 MSSFLDGFGSIIPLNLIKIFDEHELELLMCGIQNIDVKDWRENTLYKGDYHMNHIIIQ--WFWRA 918

  Fly   969 VESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRI 1033
            |.|:|:|||:||||||||:||||:.||:.|.||.   ||::|||....  ...|.|:|||||||:
  Fly   919 VLSFSNEMRSRLLQFVTGTSRVPMNGFKELYGSN---GPQMFTIEKWG--TPNNFPRAHTCFNRL 978

  Fly  1034 DLPPYETYQLLCDKLTQAVEETCGFA 1059
            ||||||.|..|.|||.:|:|.:.|||
  Fly   979 DLPPYEGYLQLKDKLIKAIEGSQGFA 1004

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028 31/136 (23%)
WW 169..198 CDD:278809 19/28 (68%)
WW 514..546 CDD:197736 11/44 (25%)
WW 562..594 CDD:197736 19/31 (61%)
HECTc 702..1058 CDD:238033 186/360 (52%)
HECTc 726..1058 CDD:214523 179/336 (53%)
Nedd4NP_648993.1 C2_NEDD4_NEDD4L 71..204 CDD:175999 31/134 (23%)
WW 248..277 CDD:278809 19/28 (68%)
WW 531..560 CDD:278809 8/28 (29%)
WW 581..613 CDD:197736 19/31 (61%)
HECTc 650..1003 CDD:238033 186/360 (52%)
HECTc 674..1003 CDD:214523 179/336 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446959
Domainoid 1 1.000 49 1.000 Domainoid score I7919
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13657at50557
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 1 1.100 - - P PTHR11254
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
98.780

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