DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and CG3356

DIOPT Version :10

Sequence 1:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_611896.1 Gene:CG3356 / 37876 FlyBaseID:FBgn0034989 Length:1122 Species:Drosophila melanogaster


Alignment Length:373 Identity:114/373 - (30%)
Similarity:194/373 - (52%) Gaps:37/373 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 LEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKG-----EEGLDYGGVAREWLHLLSREMLNPQY 763
            :.|.|:.::|::|..:......|:|.:..::|..     |.|:|.|||.||:|..|.:...:|..
  Fly   766 ITVRRSHLYEDAYDKLRPDNEPDLRFKFRIQFVSSLGLDEAGIDGGGVFREFLSELIKTAFDPNR 830

  Fly   764 GLFQYSRDDHYTLQINPD-SGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNK--P 825
            |.|..:.|:  .|..||: :.:..|:..:::|:||.||.:::....::......|..:|..|  .
  Fly   831 GFFMVTTDN--KLYPNPNVADLFEDYEKHYYFIGRILGKSIYENLLVELPLAEFFLTKLAGKYSD 893

  Fly   826 ITLGDIEGVDPDLHRSLTWMLESNISGIIES---TFSVENNSFGALVVHELKPGGASIPVTEENK 887
            :.:..:..:||:|:|:|.::  .:.||.:..   .|:|.::|.|...:.||||.|.|||||..|:
  Fly   894 VDIHQLASLDPELYRNLLYL--KDYSGDVSELNLDFTVASSSLGQTQIVELKPQGQSIPVTNSNR 956

  Fly   888 REYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGIS-SIDVNDWRNNTR 951
            .||::|..:|:....|.:...|.:||...::|...|..|..:||:::|.|.. .||:.|.:    
  Fly   957 IEYLQLIADYKLNVQIRRHCNAFRKGLSNVLPIEWLYMFSNKELQILISGAEIPIDLEDLK---- 1017

  Fly   952 LKHC------TNETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLF 1010
             |||      :.|...::.||:|:|.:....|.:||:|||..||.||.||:.|.       |..|
  Fly  1018 -KHCEYGGEFSPEHPSIVTFWEVLEGFDDMQRRQLLKFVTSCSRPPLLGFKDLD-------PPFF 1074

  Fly  1011 TIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGF 1058
             |..|.|:  :.||.|.||.|.:.|||::|.:.:.:||..|::...||
  Fly  1075 -IQNTGDM--ERLPTASTCTNLLKLPPFKTVEQMREKLLYAIQSGAGF 1119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028
PRP40 155..>283 CDD:227435
WW 169..198 CDD:459800
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 112/371 (30%)
CG3356NP_611896.1 HECTc 766..1120 CDD:238033 114/373 (31%)
Blue background indicates that the domain is not in the aligned region.

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