DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and Hace1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_006256657.1 Gene:Hace1 / 361866 RGDID:1306114 Length:916 Species:Rattus norvegicus


Alignment Length:421 Identity:172/421 - (40%)
Similarity:237/421 - (56%) Gaps:29/421 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   654 NPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALRTE-----LQTMQPQSGHCRLEVSRNE--- 710
            ||  :|:.|....|||..:|:.::...:..:....|.|     |.:.||.|......||.|:   
  Rat   501 NP--KIIFDHFHFLLECPELMSRFMHIIKAQPFKDRCEWFYEHLHSGQPDSDMVHRPVSENDILL 563

  Fly   711 -----IFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSR 770
                 ||..|..::.|.....:::.:.|:|.||||:.. ||.|||..:||.|::||.|.||..|.
  Rat   564 VHRDSIFRSSCEIVSKANCAKLKQGIAVRFHGEEGMGQ-GVVREWFDILSNEIVNPDYALFTQSA 627

  Fly   771 DDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVD 835
            |. .|.|.|.:|.||||||:||.|.|:.||:|:.|...::..||..|||.:|..|:...|:..:|
  Rat   628 DG-TTFQPNSNSYVNPDHLNYFRFAGQILGLALNHRQLVNIYFTRSFYKHILGIPVNYQDVASID 691

  Fly   836 PDLHRSLTWMLESNISGI-IESTFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRF 899
            |:..::|.|:|:::||.: :|.|||||.:.|||:....|||||.||.||:.||.|||:|....|.
  Rat   692 PEYAKNLQWILDNDISDLGLELTFSVETDVFGAMEEVPLKPGGGSILVTQNNKAEYVQLVTELRM 756

  Fly   900 MRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTR-LKHCTNETTQVL 963
            .|.|:.|..|..:||...||..|::.|||.||||::.|:..||||||..||. ......|...:.
  Rat   757 TRAIQPQINAFLQGFHMFIPPSLIQLFDEYELELLLSGMPEIDVNDWIKNTEYTSGYEREDPVIQ 821

  Fly   964 WFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVP-TQN-LPKA 1026
            |||:|||..:.|.|..||||||||||||..||..:.|.:|.   :.|||   |.|| |.| ||.:
  Rat   822 WFWEVVEDMTQEERVLLLQFVTGSSRVPHGGFANIMGGSGL---QNFTI---AAVPYTPNLLPTS 880

  Fly  1027 HTCFNRIDLPPYETYQLLCDKLTQAVEETCG 1057
            .||.|.:.||.|.:.::|.|:|..|:.  ||
  Rat   881 STCINMLKLPEYPSKEILKDRLLVALH--CG 909

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 158/368 (43%)
HECTc 726..1058 CDD:214523 151/336 (45%)
Hace1XP_006256657.1 ANK repeat 66..95 CDD:293786
ANK 66..93 CDD:197603
Ank_2 69..194 CDD:289560
ANK 92..217 CDD:238125
ANK repeat 97..128 CDD:293786
ANK repeat 130..161 CDD:293786
Ank_2 135..222 CDD:289560
ANK repeat 163..194 CDD:293786
ANK repeat 196..221 CDD:293786
Ank_4 199..249 CDD:290365
HECTc 561..910 CDD:238033 155/359 (43%)
HECTc 586..909 CDD:214523 149/332 (45%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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