DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Su(dx)

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001259898.1 Gene:Su(dx) / 33379 FlyBaseID:FBgn0003557 Length:949 Species:Drosophila melanogaster


Alignment Length:1112 Identity:344/1112 - (30%)
Similarity:485/1112 - (43%) Gaps:270/1112 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 GTHKVRITILCARNLARKDLFRLPDPFAKVQVDGTGQVYSTEISKSSLDPKWNAHYDLFLGIGDA 75
            |.|::.:||..|.  .|.:.|..|:|:.::.:|...: ..|::.|:|..||||..:         
  Fly    47 GYHQLSVTIEEAS--LRNNGFLKPNPYVELLIDSKSK-RKTDLVKNSYLPKWNEEF--------- 99

  Fly    76 ITITVWNQRKIHKGSGFLGCVRIPAFNIQSLKGAGFQRLDLGKLSPDDDELVRGQIIISLL---- 136
             |:.:.....:|                       |:.||......|   .:.|:.||:|.    
  Fly   100 -TVLITPNSTLH-----------------------FKVLDHSSFRKD---AMLGERIINLAHILQ 137

  Fly   137 SKDGPSSGNPLAIVGPSGDVRGPSEDDSSEDSLPEGWEERRTDNGRVYYVNHATKSTQWDRPRQP 201
            ..:|......|.|     |:...|:.|:           |:|.:|.:..:.:..|........||
  Fly   138 HYNGRCEFLELTI-----DLFVTSKSDN-----------RQTKSGELVAILNGLKLDMSKLQIQP 186

  Fly   202 GVVGSSHATSPQQRHNTHNGNSGDRQAPAGPTRSTTCTNLMNNGHRSRDLSVTASDERRHSTEIL 266
             |.|..:...|.|..|.    |....|.||    .:|  ::..|.|:|                 
  Fly   187 -VAGQQNGNPPVQAVNP----SVVSDAAAG----RSC--MIYGGVRAR----------------- 223

  Fly   267 SSVGKENTSPTTPVSATTTPGKKTSSSNSSSAGGRTLEQRPTNEPATPTSSTTSASVRLHSNDNH 331
                                 .:..||:.:|.||.|....|..                 ..|  
  Fly   224 ---------------------MRLRSSSGNSNGGETRSPLPNG-----------------GGD-- 248

  Fly   332 VKTPKHQTNGHAPPESTPTSPTGQQNYVNGNAQNGSTSGNGSGQAAQPQSASNGWTQEDAATTTS 396
                 |:.:..|||      ...||...:.|.|......|||| ||.||:|.             
  Fly   249 -----HRRSTQAPP------VWEQQQQQSQNQQQPLRMVNGSG-AAVPQTAP------------- 288

  Fly   397 PSTTTSPPRHSQSPPTPNISPPASVTPSANGNVHSPNANSTPAGSGG-----GSRSYTAATPG-- 454
                     :.|.||.|.::.|.:....|......|.|...|||.|.     |........||  
  Fly   289 ---------YPQQPPAPALARPLTQVYGALPENTQPAAVYLPAGGGAAVGPPGVAGPPIEQPGVG 344

  Fly   455 ----QRSQRRSSRQQGEE----SSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAARP 511
                |.:..:...|..::    :....|..:               .|:||.......:....:|
  Fly   345 LPVSQSTDPQLQTQPADDEPLPAGWEIRLDQ---------------YGRRYYVDHNTRSTYWEKP 394

  Fly   512 FLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPRIPRDFDTQH---------------------- 554
             ..||||:|:|...:|:||:....|..:||..|...|....||                      
  Fly   395 -TPLPPGWEIRKDGRGRVYYVDHNTRKTTWQRPNSERLMHFQHWQGQRAHVVSQGNQRYLYSQQQ 458

  Fly   555 -----LTL-------DAIGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTV 607
                 :|.       ||:||||.|||::..:..|||||:|.|||||:.|||..|..:.:|..|.:
  Fly   459 QQPTAVTAQVTQDDEDALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPL 523

  Fly   608 PP------TSAANAGTPAPPSATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQG 666
            ||      |:|..                          .......|..||...|.   |..|:|
  Fly   524 PPGWEIRYTAAGE--------------------------RFFVDHNTRRTTFEDPR---PGAPKG 559

  Fly   667 LLEGADLLPK-YRRDLVGKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKR 730
             .:|...:|: |.|....||...|...|:....| |.::.|:|..:||:||..||::.|.::|:|
  Fly   560 -AKGVYGVPRAYERSFRWKLSQFRYLCQSNALPS-HIKITVTRQTLFEDSYHQIMRLPAYELRRR 622

  Fly   731 LMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFV 795
            |.:.|:||||||||||:|||..|||.|:|||.|.||:|:..::|:|||||.|.||||||.||.|:
  Fly   623 LYIIFRGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLQYFKFI 687

  Fly   796 GRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGI-IESTFS 859
            ||.:.:|::||..:..|||.||||::|||.:|:.|||.:||:.:.||.|:.::||... :|..||
  Fly   688 GRFIAMALYHGRFIYSGFTMPFYKRMLNKKLTIKDIETIDPEFYNSLIWVKDNNIDECGLELWFS 752

  Fly   860 VENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLR 924
            |:....|.::.||||..|....||||||.||:.|...:|..||||||.....:||.|::|...|:
  Fly   753 VDFEVLGQIIHHELKENGEKERVTEENKEEYITLMTEWRMTRGIEQQTKTFLEGFNEVVPLEWLK 817

  Fly   925 PFDERELELVIGGISSIDVNDWRNNTRLKHCTNETTQVLWFWQVVESYSSEMRARLLQFVTGSSR 989
            .||||||||::.|:..:||.||:.||..:|....:.||:||||.|....:|.||||||||||:.|
  Fly   818 YFDERELELILCGMQDVDVEDWQRNTIYRHYNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCR 882

  Fly   990 VPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEE 1054
            ||:.||..|.||.   ||:.|.|........  ||::||||||:|||||::|..|.:|||.|:||
  Fly   883 VPVGGFAELMGSN---GPQRFCIEKVGKETW--LPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEE 942

  Fly  1055 TCGFAVE 1061
            |.||..|
  Fly   943 TEGFCQE 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028 24/120 (20%)
WW 169..198 CDD:278809 4/28 (14%)
WW 514..546 CDD:197736 13/31 (42%)
WW 562..594 CDD:197736 19/31 (61%)
HECTc 702..1058 CDD:238033 178/356 (50%)
HECTc 726..1058 CDD:214523 169/332 (51%)
Su(dx)NP_001259898.1 C2_E3_ubiquitin_ligase 48..173 CDD:175988 35/179 (20%)
WW 364..396 CDD:197736 5/47 (11%)
WW 397..426 CDD:278809 12/28 (43%)
WW 478..509 CDD:197736 18/30 (60%)
WW 522..554 CDD:197736 8/60 (13%)
HECTc 594..946 CDD:238033 178/356 (50%)
HECTc 620..946 CDD:214523 169/330 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446962
Domainoid 1 1.000 50 1.000 Domainoid score I3372
eggNOG 1 0.900 - - E1_COG5021
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D13657at50557
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 1 1.100 - - P PTHR11254
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2273
SonicParanoid 00.000 Not matched by this tool.
98.780

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