DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and CG4238

DIOPT Version :10

Sequence 1:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_608640.2 Gene:CG4238 / 33377 FlyBaseID:FBgn0031384 Length:977 Species:Drosophila melanogaster


Alignment Length:375 Identity:116/375 - (30%)
Similarity:179/375 - (47%) Gaps:44/375 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 LEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQY 768
            |:|.|.:|.|.|.:.:......|......|.|:||:|:|:||:.|||..|:...:.:.:.|||..
  Fly   615 LKVQREKILESSMKAVKGFSVSDWCGNFEVTFQGEQGIDWGGLRREWFELVCSALFDARGGLFCT 679

  Fly   769 SRDDHYTLQINPDSGVNPDH--LSYFHFVGRTLGIAVFHGHCLDGG---------FTTPFYKQLL 822
            ..|.|..| ::|:. ..|.|  |.:|.|.|:.:|..:|....  ||         |:..|..||:
  Fly   680 FHDKHQAL-VHPNP-TRPAHLKLKHFEFAGKMVGKCLFESAL--GGTYRQLVRARFSRSFLAQLI 740

  Fly   823 NKPITLGDIEGVDPDLHRS-LTWMLESNISG-------IIESTFSVENNSFGALVVHELKPGGAS 879
            ...:.....|..||||:.| :.::|::::..       .:|..:...:......:  ||.|.||.
  Fly   741 GLRVHYKYFEQDDPDLYLSKIKYILDTDLDATDTLELYFVEEMYDSSSGQLSKTI--ELIPNGAK 803

  Fly   880 IPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVN 944
            ..||...|.:|:......|....::.:..:..||...:||.:||..|||.||||::.|.....::
  Fly   804 TRVTNATKNQYLDALAQQRLCNNVKDEVDSFLKGLNSIIPDNLLSIFDENELELLMCGTGEYSIS 868

  Fly   945 DWRNNTRLKHCTN----ETTQVL-WFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGA 1004
            |::.:    |..|    |..:|| |||..|.::|....||||||.||.|::|..||:.|      
  Fly   869 DFKAH----HIANGNSAEFRRVLAWFWAGVSNFSQTEMARLLQFTTGCSQLPPGGFQEL------ 923

  Fly  1005 VGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEE 1054
             .|:   ..:||.....|||.||||||::.||.||:|:.....|..|:.|
  Fly   924 -NPQ---FQITAAPTFGNLPTAHTCFNQLCLPDYESYEQFEKSLLLAISE 969

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028
PRP40 155..>283 CDD:227435
WW 169..198 CDD:459800
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 116/375 (31%)
CG4238NP_608640.2 Filamin 238..336 CDD:395505
HECTc 615..975 CDD:238033 116/375 (31%)
Blue background indicates that the domain is not in the aligned region.

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