DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Wwp2

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001099654.1 Gene:Wwp2 / 291999 RGDID:1310091 Length:870 Species:Rattus norvegicus


Alignment Length:908 Identity:305/908 - (33%)
Similarity:427/908 - (47%) Gaps:214/908 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   233 TRSTTCTN-LMNNGHRSRDLSVTASDERRHSTEILSSVGKENT----SPT-----TPVSATTTPG 287
            |.|...:| |.|||.:..:..:|.:.:..:...::|  |.|.|    .||     .|..:..|.|
  Rat    98 TASVNLSNVLKNNGGKMENTQLTLNLQTENKGSVVS--GGELTIFLDGPTVDLGSVPNGSAVTDG 160

  Fly   288 KKTSSSNSSSAGGRTLEQRPTNEPATPTSSTTSASVRLHSNDNHVKTPKHQTNGHAPPESTPTSP 352
            .:..|..||   |..|.....::|  |:::......|.|         :|.........:|....
  Rat   161 SQPPSRESS---GTALAPETRHQP--PSTNCFGGRSRTH---------RHSGGSARTATATGEQS 211

  Fly   353 TGQQNYVNGNAQNGSTSGNGSGQAAQPQSASNGWTQEDAATTTSPST-----TTSPPRHSQSPPT 412
            .|.:|......:|.|:||           .:||...|:..|.:.|..     .||||        
  Rat   212 PGARNRHRQPVKNPSSSG-----------LANGTVSEEPTTASDPEELSVVGVTSPP-------- 257

  Fly   413 PNISPPASVTPSANGNVHSPNANSTPAGSGGGSRSYTAATPGQRSQRRSSRQQGEESSTRRRSSR 477
               :..:||:|       :||..|.||.|          ||.          :|||.||      
  Rat   258 ---AAASSVSP-------NPNTTSLPAPS----------TPA----------EGEEPST------ 286

  Fly   478 GTRNGGTSGGGGGGGSGQRYASAAIAAAN-------QAARP-----FLD-----------LPPGY 519
                           ||.:...||..|.:       |...|     ::|           ||||:
  Rat   287 ---------------SGTQQLPAAAQAPDALPAGWEQRQLPNGRVYYVDHNTKTTTWERPLPPGW 336

  Fly   520 EMRTTQQGQVYFYHIPTGVSTWHDP--RIPRDFD------------TQHLTL------------- 557
            |.||..:|:.|:....|..:||..|  ...|:::            .||.:.             
  Rat   337 EKRTDPRGRFYYVDHNTRTTTWQRPTAEYVRNYEQWQSQRNQLQGAMQHFSQRFLYQSSSASTDH 401

  Fly   558 DAIGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPP------TSAA--- 613
            |.:||||.|||:|:. :||||:|:||.||||:.|||..|    ||:...:||      ||..   
  Rat   402 DPLGPLPPGWEKRQD-NGRVYYVNHNTRTTQWEDPRTQG----MIQEPALPPGWEMKYTSEGVRY 461

  Fly   614 ----NAGTPAPPSATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLL 674
                |                                 |.|||...|.   |....|..:|:.  
  Rat   462 FVDHN---------------------------------TRTTTFKDPR---PGFESGTKQGSP-- 488

  Fly   675 PKYRRDLVGKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFKGEE 739
            ..|.|....|....|. |........|.::.|||..:||:|::.||.|:..|:|:||.:..:|||
  Rat   489 GAYERSFRWKYHQFRF-LCHSNALPSHVKISVSRQTLFEDSFQQIMNMKPYDLRRRLYIIMRGEE 552

  Fly   740 GLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVF 804
            ||||||:||||..|||.|:|||.|.||:|:..::|.|||||.|.:|||||:||.|:||.:.:|::
  Rat   553 GLDYGGIAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASSINPDHLTYFRFIGRFIAMALY 617

  Fly   805 HGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGI-IESTFSVENNSFGAL 868
            ||..:|.|||.||||::|||..||.|:|.:||:.:.|:.|:.|:|:... :|..|..:....|.:
  Rat   618 HGKFIDTGFTLPFYKRMLNKRPTLRDLESIDPEFYNSIIWIKENNLDECGLELFFIQDMEILGKV 682

  Fly   869 VVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELEL 933
            ..||||.||.:|.||||||.||:.|..::||.||:|:|..|...||.|:.|...||.|||:||||
  Rat   683 TTHELKEGGENIRVTEENKEEYIMLLTDWRFTRGVEEQTKAFLDGFNEVAPLEWLRYFDEKELEL 747

  Fly   934 VIGGISSIDVNDWRNNTRLKHCTNETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRAL 998
            ::.|:..||::||:.|...:|.|..:.|:.||||||:...:|.|.||||||||:.|:|:.||..|
  Rat   748 MLCGMQEIDMSDWQKNAIYRHYTKSSKQIQWFWQVVKEMDNEKRIRLLQFVTGTCRLPVGGFAEL 812

  Fly   999 QGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGFAVE 1061
            .||.   ||:.|.|........  ||::||||||:|||||::|:.|.:||..|:|||.||..|
  Rat   813 IGSN---GPQKFCIDRVGKETW--LPRSHTCFNRLDLPPYKSYEQLKEKLLYAIEETEGFGQE 870

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 14/44 (32%)
WW 562..594 CDD:197736 20/31 (65%)
HECTc 702..1058 CDD:238033 174/356 (49%)
HECTc 726..1058 CDD:214523 165/332 (50%)
Wwp2NP_001099654.1 C2_E3_ubiquitin_ligase 17..142 CDD:175988 12/45 (27%)
WW 302..331 CDD:278809 3/28 (11%)
WW 332..361 CDD:278809 12/28 (43%)
WW 407..435 CDD:278809 17/28 (61%)
WW 447..477 CDD:238122 10/65 (15%)
HECTc 516..868 CDD:238033 175/356 (49%)
HECTc 539..867 CDD:214523 165/332 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D167687at2759
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100256
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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