DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and ptr1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_594902.1 Gene:ptr1 / 2542537 PomBaseID:SPAC19D5.04 Length:3227 Species:Schizosaccharomyces pombe


Alignment Length:360 Identity:159/360 - (44%)
Similarity:230/360 - (63%) Gaps:8/360 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly   704 LEVSRNEIFEESYRLIMKMRAKDMR-KRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQ 767
            :.|.|:.:|.:|||.:....|.::: .:|.:.|:.|||:|.|||.||||.:|:|:|.||.|.||.
pombe  2872 ITVRRDHVFLDSYRALHFKDADEVKFSKLNIHFRDEEGVDAGGVTREWLQVLARQMFNPDYALFL 2936

  Fly   768 YSRDDHYTLQINPDSGVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIE 832
            ....|..|...|.||.|||||||:|.|.||.:|.|::.|..||..|:...||.:|::.:::.|||
pombe  2937 PVTGDATTFHPNRDSSVNPDHLSFFKFTGRIIGKALYDGRLLDCHFSRAVYKHMLHRSVSVKDIE 3001

  Fly   833 GVDPDLHRSLTWMLESNISGIIESTFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNY 897
            .:|||.::||.|||.::|:.||...|:||.:.||...|.:|.|.|.:|||||.||:.||...|:|
pombe  3002 SLDPDYYKSLVWMLNNDITDIITEEFAVEKDVFGEKTVVDLIPNGRNIPVTELNKQNYVNRMVDY 3066

  Fly   898 RFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHCTNETTQV 962
            :....::.|..:|..||.::|||||::.|:|:||||:|.|:..||::||:|||........:.||
pombe  3067 KLRESVKDQLKSLLDGFSDIIPSHLIQIFNEQELELLISGLPEIDIDDWKNNTEYHGYNVSSPQV 3131

  Fly   963 LWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAH 1027
            .|||:.|.|:..|.||:||||.||:|:|||.||:.|:|.:|.   :.|.||.:.. ....||::|
pombe  3132 QWFWRAVRSFDEEERAKLLQFATGTSKVPLNGFKELEGMSGF---QRFNIHKSYG-SLNRLPQSH 3192

  Fly  1028 TCFNRIDLPPYETYQLLCDKLTQAVEETC---GFA 1059
            ||||::|||.|:||:.|...|..|:.|..   |||
pombe  3193 TCFNQLDLPEYDTYEQLRSMLLTAINEGSEGFGFA 3227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 156/357 (44%)
HECTc 726..1058 CDD:214523 149/335 (44%)
ptr1NP_594902.1 DUF908 96..367 CDD:283630
DUF913 436..735 CDD:283642
HARE-HTH <1930..2018 CDD:294801
DUF4414 2267..2347 CDD:291075
HUL4 2314..3227 CDD:227354 157/358 (44%)
HECTc 2870..3225 CDD:238033 156/356 (44%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000080
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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