DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Yap1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_006509915.1 Gene:Yap1 / 22601 MGIID:103262 Length:494 Species:Mus musculus


Alignment Length:596 Identity:134/596 - (22%)
Similarity:197/596 - (33%) Gaps:195/596 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 PKHQTNGHAPPE--------STPTSPTGQQ-NYVNGNAQNGSTSGNGSGQAAQPQSASNGWTQED 390
            |:....|.|||.        :.|..|.|.| .:|.|:::                      |..:
Mouse     9 PQPAPQGPAPPSVSPAGTPAAPPAPPAGHQVVHVRGDSE----------------------TDLE 51

  Fly   391 AA--TTTSPSTTTSP---PRHSQSPPTPNISPPASVTPSANGNVHSPNANSTPAGSGGGSRSYTA 450
            |.  ...:|.|...|   |...:..|.....||   .|.:    ||..| ||.||:.|      |
Mouse    52 ALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPP---EPKS----HSRQA-STDAGTAG------A 102

  Fly   451 ATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAARPFLD- 514
            .||               ...|..||..:...|....|....||.....||..||....:...: 
Mouse   103 LTP---------------QHVRAHSSPASLQLGAVSPGTLTASGVVSGPAAAPAAQHLRQSSFEI 152

  Fly   515 -----LPPGYEMRTTQQGQVYFYHIPTGVSTWHDPR--------IPRDFD---TQHLTLDAIGPL 563
                 ||.|:||..|..||.||.:.....:||.|||        :|....   .|.|...|.|||
Mouse   153 PDDVPLPAGWEMAKTSSGQRYFLNHNDQTTTWQDPRKAMLSQLNVPAPASPAVPQTLMNSASGPL 217

  Fly   564 PSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPAPPSATPATP 628
            |.||||..|..|.||:::|.|:||.:.||||.                                 
Mouse   218 PDGWEQAMTQDGEVYYINHKNKTTSWLDPRLD--------------------------------- 249

  Fly   629 SAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRALRTELQ 693
                   |:...|.|...|.......|| .:.|..|||.:.|            |.....:.::|
Mouse   250 -------PRFGKAMNQRITQSAPVKQPP-PLAPQSPQGGVLG------------GGSSNQQQQIQ 294

  Fly   694 TMQPQSGHCRLEVSRNEIFE----ESYRLIMKMRA-----KDMRKRLMVKFKGEEG-----LDYG 744
            ..|.|....||.:.:.|:|.    ::.|.|....|     :::..|..:....::|     :...
Mouse   295 LQQLQMEKERLRLKQQELFRQVRPQAIRNINPSTANAPKCQELALRSQLPTLEQDGGTPNAVSSP 359

  Fly   745 GVAREWLHLLSREMLNP--QYGLFQYSRDD---------HYTLQINPDSGVN------------- 785
            |:::| |..::....:|  ..|.: :|||:         .|::...||..:|             
Mouse   360 GMSQE-LRTMTTNSSDPFLNSGTY-HSRDESTDSGLSMSSYSIPRTPDDFLNSVDEMDTGDTISQ 422

  Fly   786 ----------PDHLSYFHFVGRTLGIAVFHGHC--LDGGFTTPFYKQLLNKPITLGDIEGV---- 834
                      ||:|.  ...|..:.:....|..  ::|....|..::.|:..|.  |:|.|    
Mouse   423 STLPSQQSRFPDYLE--ALPGTNVDLGTLEGDAMNIEGEELMPSLQEALSSEIL--DVESVLAAT 483

  Fly   835 DPDLHRSLTWM 845
            ..|....|||:
Mouse   484 KLDKESFLTWL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 15/45 (33%)
WW 562..594 CDD:197736 17/31 (55%)
HECTc 702..1058 CDD:238033 37/198 (19%)
HECTc 726..1058 CDD:214523 30/165 (18%)
Yap1XP_006509915.1 FAM181 <61..>141 CDD:373671 27/108 (25%)
WW 159..188 CDD:238122 12/28 (43%)
WW 217..246 CDD:366073 14/28 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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