DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and Nedd4

DIOPT Version :10

Sequence 1:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001344927.1 Gene:Nedd4 / 17999 MGIID:97297 Length:1207 Species:Mus musculus


Alignment Length:1041 Identity:311/1041 - (29%)
Similarity:429/1041 - (41%) Gaps:338/1041 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 FLGIGDAITITVWNQRKI--------HKGSGFLGCVRIPAFNI--------------------QS 105
            |....|....:.|.||.:        .....|||.|.:|.:.:                    :|
Mouse   450 FASGNDGKVDSFWRQRDLTNELSDVCKTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRS 514

  Fly   106 LKG--AGFQRLDLGKL----SPDD-----DELVRGQIIISLLSKDGPSSGNPLAIVGPSGDVRGP 159
            .|.  .|:.||.:..|    |.|:     :||..|.:::     |.|.:...|           |
Mouse   515 HKSRVKGYLRLKMTYLPKNGSEDENADQAEELEPGWVVL-----DQPDAATHL-----------P 563

  Fly   160 SEDDSSEDSLPEGWEERRTDNGRVYYVNHATKSTQWDRPRQPGVVGSSHATSPQQRHNTHNGNSG 224
            ...:.|  .||.|||||:...||.|||||.::.|||.||            ||..  :..:.::.
Mouse   564 HPPEPS--PLPPGWEERQDVLGRTYYVNHESRRTQWKRP------------SPDD--DLTDEDND 612

  Fly   225 DRQAPAGPTRSTTCTNLMNNGHRSRDLSVTASDERRHSTEILSSVGKENTSPTTPVSATTTPGKK 289
            |.|..|  .|:.|....:     |.|:....:.|...:.||:..  .|||               
Mouse   613 DMQLQA--QRAFTTRRQI-----SEDVDGPDNRESPENWEIVRE--DENT--------------- 653

  Fly   290 TSSSNSSSAGGRTLEQRPTNEPATPTSSTTSASVRLHSNDNHVKTPKHQTNGHAPPESTPTSPTG 354
                   ...|:.::..|:......|......:.||....|             |..|.|.    
Mouse   654 -------EYSGQAVQSPPSGHIDVQTHLAEEFNTRLAVCGN-------------PATSQPV---- 694

  Fly   355 QQNYVNGNAQNGSTSGNGSGQAAQPQSASNGWTQEDAATTTSPSTTTSPPRHSQSPPTPNISPPA 419
                         ||.|.|.:....|:..                      ..:.|..|.:.|  
Mouse   695 -------------TSSNHSSRGGSLQTCI----------------------FEEQPTLPVLLP-- 722

  Fly   420 SVTPSANGNVHSPNANSTPAGSGGGSRSYTAATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGT 484
                                                                            |
Mouse   723 ----------------------------------------------------------------T 723

  Fly   485 SGGGGGGGSGQRYASAAIAAANQAARPFLDLPPGYEMRTTQQGQVYFYHIPTGVSTWHDPRI--- 546
            |.|                           ||||:|.:...:|:.|:....:..:||..|.:   
Mouse   724 SSG---------------------------LPPGWEEKQDDRGRSYYVDHNSKTTTWSKPTMQDD 761

  Fly   547 PRDFDTQHL----TLDAIGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTV 607
            ||.....||    ..:.:||||.|||:|....|||:|::||.:.||:.||||.            
Mouse   762 PRSKIPAHLRGKTDSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRLQ------------ 814

  Fly   608 PPTSAANAGTPAPPSATPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGAD 672
                  |.....|            |||                                     
Mouse   815 ------NVAITGP------------AVP------------------------------------- 824

  Fly   673 LLPKYRRDLVGKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRK-RLMVKFK 736
                |.||...|....|.:|:..........:::.|..|.|:|||.||.::..|:.| ||.::|.
Mouse   825 ----YSRDYKRKYEFFRRKLKKQTDIPNKFEMKLRRANILEDSYRRIMGVKRADLLKARLWIEFD 885

  Fly   737 GEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGV-NPDHLSYFHFVGRTLG 800
            ||:|||||||||||..|:|:||.||.||||:||..|:|||||||:||: |.||||||.|:||..|
Mouse   886 GEKGLDYGGVAREWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAG 950

  Fly   801 IAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGIIESTFSVENNSF 865
            :||:||..|||.|..||||.:|.|.|||.|:|.||.:.:.||.|:||::.:. ::..|.::...|
Mouse   951 MAVYHGKLLDGFFIRPFYKMMLQKLITLHDMESVDSEYYSSLRWILENDPTE-LDLRFIIDEELF 1014

  Fly   866 GALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERE 930
            |....||||.||:.|.||.:||:||:.|.:.:||:..|::|..|.::||.||||..|::.|||.|
Mouse  1015 GQTHQHELKTGGSEIVVTNKNKKEYIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENE 1079

  Fly   931 LELVIGGISSIDVNDWRNNTRLKHCTNETTQVL-WFWQVVESYSSEMRARLLQFVTGSSRVPLQG 994
            |||::.|:..:||||||.:|:.|:..:...||: |||:.|....||.|.||||||||:||||:.|
Mouse  1080 LELLMCGLGDVDVNDWREHTKYKNGYSMNHQVIHWFWKAVWMMDSEKRIRLLQFVTGTSRVPMNG 1144

  Fly   995 FRALQGSTGAVGPRLFTIHL--TADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCG 1057
            |..|.||.   ||:.||:..  |.|    .||:|||||||:||||||::..|.|||..|:|.|.|
Mouse  1145 FAELYGSN---GPQSFTVEQWGTPD----KLPRAHTCFNRLDLPPYESFDELWDKLQMAIENTQG 1202

  Fly  1058 F 1058
            |
Mouse  1203 F 1203

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028 21/104 (20%)
PRP40 155..>283 CDD:227435 36/127 (28%)
WW 169..198 CDD:459800 17/28 (61%)
WW 514..546 CDD:197736 10/31 (32%)
WW 562..594 CDD:197736 17/31 (55%)
HECTc 702..1058 CDD:238033 184/360 (51%)
Nedd4NP_001344927.1 C2 <477..530 CDD:472691 10/52 (19%)
WW 574..602 CDD:238122 17/39 (44%)
WW 727..756 CDD:459800 9/28 (32%)
WW 781..813 CDD:197736 17/31 (55%)
HECTc 874..1203 CDD:214523 176/336 (52%)

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