DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and eel-1

DIOPT Version :10

Sequence 1:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_001294472.1 Gene:eel-1 / 177084 WormBaseID:WBGene00022069 Length:4185 Species:Caenorhabditis elegans


Alignment Length:469 Identity:178/469 - (37%)
Similarity:255/469 - (54%) Gaps:49/469 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   626 ATPSAAAAVPPQATPASNATPTTLTTTTNP----------PHRIVPDLPQGLLEGADLL------ 674
            |:.||||||      ||:.:...|....:|          .||.|  |.|.|.:...:|      
 Worm  3731 ASSSAAAAV------ASSVSHDGLREDLDPDTAKLIEFAEKHRQV--LNQALRQNNAVLSAGGPF 3787

  Fly   675 ------PKYRRDLVGKLRALRTELQTMQPQSGH--------CRLEVSRNEIFEESYRLIMKMRAK 725
                  ||. .|...|.:..|.||..::|.:..        ..::||||.:|.:|:|.:.::|..
 Worm  3788 AILTQFPKL-LDFDVKRKYFRKELTKLEPSNSRMPRYRRNDVSVQVSRNRVFSDSFRELFRLRPS 3851

  Fly   726 DMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLS 790
            :.:.|..:.|:||||.|.||:.|||..:::||:.||.|.||..:..|..|..||..|.:||:||.
 Worm  3852 EWKNRFYIIFQGEEGQDAGGLLREWFSVITREIFNPNYALFITAPGDMVTYMINKASYINPEHLD 3916

  Fly   791 YFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGVDPDLHRSLTWMLESNISGI-I 854
            ||.||||.:..:||....||..||..|||.:||.|:...|:|..||...:||.::|::.|..: :
 Worm  3917 YFKFVGRLIAKSVFEHKYLDCYFTRAFYKHILNLPVRYQDLESEDPAFFKSLDFLLQNPIDDLAL 3981

  Fly   855 ESTFSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIP 919
            :.|||.|...||...|.:|||.|..|.|.:.||.|||||....:....|.:|..|...||.|:||
 Worm  3982 DLTFSTEVEEFGVRSVRDLKPNGRKIEVNDANKDEYVKLVCQMKMTGSIRKQLDAFLTGFYEIIP 4046

  Fly   920 SHLLRPFDERELELVIGGISSIDVNDWRNNTRLKHCTNETTQVLWFWQVVESYSSEMRARLLQFV 984
            ..|:..|:|:||||:|.|:.::|::|...||..|.....:|.:.|||:.:.|:..|.:|:.||||
 Worm  4047 KDLISMFNEQELELLISGLPTVDIDDMAANTDYKGFQKTSTHIQWFWRALRSFEKEDKAKFLQFV 4111

  Fly   985 TGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLT 1049
            ||:|:||||||.:|:|..|.   :.|:||:.:. ....||.||||||::|||.||:|:.|...|.
 Worm  4112 TGTSKVPLQGFASLEGMNGV---QKFSIHMDSR-GGDRLPAAHTCFNQLDLPQYESYEKLRQSLL 4172

  Fly  1050 QAVEETC----GFA 1059
            .|:.| |    |||
 Worm  4173 LAIRE-CTEGFGFA 4185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028
PRP40 155..>283 CDD:227435
WW 169..198 CDD:459800
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 149/360 (41%)
eel-1NP_001294472.1 DUF908 95..375 CDD:428721
DUF913 576..935 CDD:461803
UBA_VP13D 1442..1476 CDD:270491
WWE 1787..1846 CDD:460715
PRK12323 <2950..3132 CDD:481241
UBM 2980..3009 CDD:464159
UBM 3050..3080 CDD:464159
HECTc 3830..4183 CDD:238033 149/357 (42%)
Blue background indicates that the domain is not in the aligned region.

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