DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and oxi-1

DIOPT Version :10

Sequence 1:NP_523779.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_499392.1 Gene:oxi-1 / 176515 WormBaseID:WBGene00003898 Length:1066 Species:Caenorhabditis elegans


Alignment Length:420 Identity:127/420 - (30%)
Similarity:198/420 - (47%) Gaps:45/420 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   672 DLLPKYRRDLVGKLRALRTELQTMQPQSGHCRLEVSRNEIFEESYRLIMKMRAKDMRKRLMVKFK 736
            |.:..:||.:......:.|.|...|.|:.   :.|.||.|.|:.:..:.|:....::..:.|||.
 Worm   656 DRMLLFRRQVQDDKNRVATSLNDPQMQTW---ITVQRNRIIEDGFNHLSKLTIPALKSTIRVKFV 717

  Fly   737 GEEGL-----DYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINPDSGVNPDHLSYFHFVG 796
            .|:||     |..||.:|:|.|..:::.:||..||  |......|..:|.|.::.|||:.|.|||
 Worm   718 NEQGLDEAGIDQDGVFKEFLELTLKKVFDPQLNLF--STTSTGVLYPSPTSSLHDDHLALFTFVG 780

  Fly   797 RTLGIAVFHGHCLDGGFTTPFYKQLL--NKPITLGDIEGVDPDLHRSLTWM--LESNISGIIEST 857
            |.||.||:.|..:|..........:|  ::.....::..:||:|:||||::  .|..::. :..|
 Worm   781 RMLGKAVYEGIVVDVQLAPVLLAAVLGSHRLCAFDELSQLDPELYRSLTFVKRYEGEMAD-LSLT 844

  Fly   858 FSVENNSFGALVVHELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHL 922
            |||:.:..|.:...:|.|.|.:|.||.|||.:||....::|..|..::|..|...|...::....
 Worm   845 FSVDEDFMGKISTVDLVPSGRTISVTNENKIDYVHRMAHHRVFRRTQEQCKAFVTGMQSILQPTW 909

  Fly   923 LRPFDERELELVIGGISS-IDVNDWRNNTRL------KHCTNETTQVLWFWQVVES-YSSEMRAR 979
            |..|...:|:.:|.|::| ||:.|.:.|.:.      .|     ..:.|.|.::|: ::||.|..
 Worm   910 LSLFAPNDLQCLISGVNSDIDLADLKRNVQYFGGFHGNH-----RLIKWLWDILENKFTSEERKL 969

  Fly   980 LLQFVTGSSRVPLQGFRAL----------------QGSTGAVGPRLFTIHLTADVPTQNLPKAHT 1028
            .|:|||..||.|:.||..|                ||.|.....|.| :.|........||.|.|
 Worm   970 FLKFVTSCSRPPVLGFSYLEPPFSIRCVEVSDDQDQGDTLGSVVRGF-LALRKGTAATRLPTAST 1033

  Fly  1029 CFNRIDLPPYETYQLLCDKLTQAVEETCGF 1058
            |||.:.||.|....||.:||..|:....||
 Worm  1034 CFNLLKLPNYNKKSLLLEKLRYAIHAGTGF 1063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_523779.1 C2_Smurf-like 14..135 CDD:176028
PRP40 155..>283 CDD:227435
WW 169..198 CDD:459800
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 118/388 (30%)
oxi-1NP_499392.1 HECTc 684..1064 CDD:238033 120/392 (31%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.