DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and etc-1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:NP_495842.1 Gene:etc-1 / 174388 WormBaseID:WBGene00008429 Length:1001 Species:Caenorhabditis elegans


Alignment Length:375 Identity:109/375 - (29%)
Similarity:181/375 - (48%) Gaps:35/375 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly   706 VSRNEIFEESYRLIM-KMRA------KDMRKRLMVKFKG--EEGLDYGGVAREWLHLLSREMLNP 761
            |.|::::.:::.... ||:.      |.|.:..||.:.|  |.|:|.||:.||:|..|.:...|.
 Worm   637 VRRDQVYMDAFETFAPKMQGDKVNDLKSMVRVKMVNWAGMNESGIDGGGIFREFLSELLKTAFNV 701

  Fly   762 QYGLFQYSRDDHYTLQINPDS----GVNPDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLL 822
            :.|.|.::  :...|..||.:    ||  |.|::|.|:||.:|..::.....:..|...|..|:.
 Worm   702 ERGFFTFT--ESKLLYPNPTAPFLLGV--DCLAHFQFIGRMIGKLIYERQLQEVRFAEFFIAQIF 762

  Fly   823 ----NKPITLGDIEGVDPDLHRSLTWMLESNISGI--IESTFSVENNSFGALVVHELKPGGASIP 881
                ||.:.|..::..||.:.:.|..:.:.|...:  ::..|||..:..|.:....|||.|:...
 Worm   763 ETDKNKDVDLQHMKSFDPIIFKHLKALQKMNNRELDELQLDFSVVTSDMGLVRNVNLKPNGSKFR 827

  Fly   882 VTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLRPFDERELELVIGGISSI-DVND 945
            ||.||..|||:|||||...:.|.....|::||..|:|....:|.|...||:::|.|...: ...:
 Worm   828 VTVENVHEYVRLYVNYHLKQRIASMVDAVRKGISEIISIEWMRMFAPHELQIMIAGYEEVFTAKE 892

  Fly   946 WRNNTRLKHC--TNETTQVLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPR 1008
            .|....|:..  |.:......||.|::..|::.:..||:||||.||.|:.||:::|       ||
 Worm   893 LRKFCELRFAAGTQDINYEEMFWDVIDKLSNDDKKALLKFVTGCSRAPVDGFKSIQ-------PR 950

  Fly  1009 LFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEETCGF 1058
            :..:.:.:.  ...||.:.||.|.:.:|.|.....|.:||..|:....||
 Worm   951 MGVLVIPSS--DDELPTSATCMNMLRIPKYSNRTKLEEKLRYAINSGAGF 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736
WW 562..594 CDD:197736
HECTc 702..1058 CDD:238033 107/373 (29%)
HECTc 726..1058 CDD:214523 102/346 (29%)
etc-1NP_495842.1 HECTc 661..998 CDD:214523 103/349 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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