DRSC/TRiP Functional Genomics Resources

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Protein Alignment Smurf and Trip12

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_011236956.1 Gene:Trip12 / 14897 MGIID:1309481 Length:2074 Species:Mus musculus


Alignment Length:1309 Identity:269/1309 - (20%)
Similarity:446/1309 - (34%) Gaps:383/1309 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 QVYSTEISKSSLDPKWNAHYDLFLGIGDAITITVWNQRKIHKGSGFLGCVRIPAFNIQSLKGAGF 111
            ||...|||.|:|              |...||...:.::|::.:|....::.....:.:...:|:
Mouse   840 QVGEDEISLSTL--------------GRVYTIDFNSMQQINEDTGTARAIQRKPNPLANSNTSGY 890

  Fly   112 QRLD----LGKLSPDDDELVRGQI--IISLLSKDGPSSGNP----------LAIV---------- 150
            ..|.    ..:|..:|.||.:..|  :..:|.:...||..|          |.|:          
Mouse   891 SELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKD 955

  Fly   151 -----GPSGDVRGPSEDDSSED----------------SLPEGWEERRTDNGRVYYVNHATKSTQ 194
                 ..|..:....   ||:|                .||:.:.......|.::.|.|..:|  
Mouse   956 VLKNHAVSSHIASML---SSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAES-- 1015

  Fly   195 WDRPRQPGVVGSSHATSPQQRHNTHNGNSGDRQAPAGPTRSTTCTNLMNN-G----HRSRDLSVT 254
                       .|..|||.:.....:|:.|. ..||....:|..||...: |    ..|||.|:.
Mouse  1016 -----------ESLLTSPPKACTNGSGSLGS-TTPASSGTATAATNASADLGSPSLQHSRDDSLD 1068

  Fly   255 ASDERRHSTEILSSVGKENTSPTTP---------------VSATTTPGKKTS--SSNSSSAGGRT 302
            .|.:.|.| ::|.........|..|               .|.|||...|:|  :|.:....||.
Mouse  1069 LSPQGRLS-DVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRL 1132

  Fly   303 LEQRPTN--EPATPTSSTTSASVRLHSNDNHVKTPKHQTNGHAPPE----------------STP 349
            ..|..:|  |||  .::..|...|..|.|. :...:.:..|....:                |.|
Mouse  1133 SAQSNSNNIEPA--RTAGVSGLARAASKDT-ISNNREKIKGWIKEQAHKFVERYFSSENMDGSNP 1194

  Fly   350 T--------SPTGQQN-YVNGNAQ-----NGSTSGNGSGQAAQPQSASNGWTQEDAATTTSPSTT 400
            .        :.|.|.| .|:|.|:     ....|   ....:..:...:|:.::.....||.:..
Mouse  1195 ALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVS---ESDVSSFEIQHSGFVKQLLLYLTSKNEK 1256

  Fly   401 TSPPRHSQ---------SPPTPNISPPASVTPSANGN----VHSPN------------ANSTPAG 440
            .:..|..:         |.|.|...|...|.|..:..    ||..|            .:..|:|
Mouse  1257 DAVGREIRLKRFLHVFFSSPLPGEEPVGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKVHDFPSG 1321

  Fly   441 SGGGSRSYTAATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAA 505
            :|.|         |..|..|.| |..:..:|.:...:..|:...:......|...:....|:.  
Mouse  1322 NGAG---------GSFSLNRGS-QALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALV-- 1374

  Fly   506 NQAARPFL-------------------------DLPPGYEMRTTQQGQV----YFY---H-IPTG 537
             ||...:|                         ::......:....|.|    .||   | :|..
Mouse  1375 -QAIERYLVVRGIFRYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYN 1438

  Fly   538 VSTWHDPRIPRDF-----DTQHLTLDAIGPLPSG--WEQRKTASGRVYF--VDHNNRTTQ----- 588
            ::.:   :..|.|     |.:..|.|...||...  |.:..|    :::  |..:..:|:     
Mouse  1439 MTVY---QAVRQFSVQAEDERESTDDESNPLGRAGIWTKTHT----IWYKPVREDEESTKDCVGG 1496

  Fly   589 ----------FTDPRLSGSILQMIRRGTVPPTSAANA----GTPAPP-SATPATPSAAA------ 632
                      .|.||.:....::...|..|  |.||.    ..|.|| :.|...||...      
Mouse  1497 KRGRAQTAPTKTSPRNAKKHDELWHDGVCP--SVANPLEVYLIPTPPENITFEDPSLDVILLLRV 1559

  Fly   633 --------------AVPPQATPASNATPTTLTTTTN-----PPHRIVPDLPQGLLEGADLLP--- 675
                          |:..:..|.|....:.||...|     |...:..::|..|.|.....|   
Mouse  1560 LHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFF 1624

  Fly   676 ------------KYRRDLVGKLRALRTELQT-------------MQPQSGHCRLEVSRNEIFEES 715
                        .:.||     ||::..|.|             :.|:....:..|:|.|:.:::
Mouse  1625 PFDTRQMLFYVTAFDRD-----RAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQA 1684

  Fly   716 YRLIMKMRAKDMRKRLMVKFKGEEGLDYGGVAREWLHLLSREMLNPQYGLFQYSRDDHYTLQINP 780
            ..::..:.:.  |..|.::::.|.|...|... |:..|:|:|:......|:   |.:..||. ||
Mouse  1685 ESVMQDLGSS--RAMLEIQYENEVGTGLGPTL-EFYALVSQELQRADLCLW---RGEEVTLS-NP 1742

  Fly   781 DSG---------------------VNPDHLS----YFHFVGRTLGIAVFHGHCLDGGFTTPFYKQ 820
            ...                     ..|.|::    .|.|:|:.:..|:.....:|.....||||.
Mouse  1743 KGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKW 1807

  Fly   821 LLNK--PITLGDIEGVDPDLHRSLTWM---------LESNISGIIES-TFSVENNSFGALVVH-- 871
            :|.:  .:|..|:..:||.:.||:..:         ||.:.|...|| .:::|..:.....|.  
Mouse  1808 MLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDL 1872

  Fly   872 ------------ELKPGGASIPVTEENKREYVKLYVNYRFMRGIEQQFLALQKGFCELIPSHLLR 924
                        |||.||..||||..|..||::|.:.:....|:.:||.:.:.||..:.|...|:
Mouse  1873 GLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVCRQFDSFRDGFESVFPLCHLQ 1937

  Fly   925 PFDERELELVIGGISSIDVNDWRNNTRLKHC------TNETTQVLWFWQVVESYSSEMRARLLQF 983
            .|...||:.::.| |..|.  |...|.::.|      |:::..|.:.::::.|:.:|.:...|||
Mouse  1938 YFYPEELDQLLCG-SKADT--WDAKTLMECCRPDHGYTHDSRAVKFLFEILSSFDNEQQRLFLQF 1999

  Fly   984 VTGSSRVPLQGFRALQGSTGAVGPRLFTIHLT---ADVPTQNLPKAHTCFNRIDLPPYETYQLLC 1045
            ||||.|:|:.|||:|       .|.|..:..|   .:.|...||...||.|.:.||.|.:..::.
Mouse  2000 VTGSPRLPVGGFRSL-------NPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIDIMR 2057

  Fly  1046 DKLTQAVEE 1054
            |||..|..|
Mouse  2058 DKLLIAARE 2066

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028 19/93 (20%)
WW 169..198 CDD:278809 6/28 (21%)
WW 514..546 CDD:197736 6/39 (15%)
WW 562..594 CDD:197736 8/50 (16%)
HECTc 702..1058 CDD:238033 106/413 (26%)
HECTc 726..1058 CDD:214523 103/389 (26%)
Trip12XP_011236956.1 SRP1 489..>714 CDD:227396
WWE 814..876 CDD:397111 12/49 (24%)
HECTc 1672..2072 CDD:238033 106/412 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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