DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Smurf and YAP1

DIOPT Version :9

Sequence 1:NP_001261061.1 Gene:Smurf / 36999 FlyBaseID:FBgn0029006 Length:1061 Species:Drosophila melanogaster
Sequence 2:XP_005271435.1 Gene:YAP1 / 10413 HGNCID:16262 Length:510 Species:Homo sapiens


Alignment Length:599 Identity:132/599 - (22%)
Similarity:197/599 - (32%) Gaps:185/599 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   335 PKHQTNGHAPPESTPTSPTGQQNYVNGNAQNGSTSGNG----SGQAAQPQSASNG----WTQEDA 391
            |:....|...|.|.|  |.||          |..||.|    :...|.||:...|    ..:.|:
Human     9 PQPAPQGQGQPPSQP--PQGQ----------GPPSGPGQPAPAATQAAPQAPPAGHQIVHVRGDS 61

  Fly   392 AT--------TTSPSTTTSP---PRHSQSPPTPNISPPASVTPSANGNVHSPNANSTPAGSGGGS 445
            .|        ..:|.|...|   |...:..|.....||   .|.:    ||..| ||.||:.|  
Human    62 ETDLEALFNAVMNPKTANVPQTVPMRLRKLPDSFFKPP---EPKS----HSRQA-STDAGTAG-- 116

  Fly   446 RSYTAATPGQRSQRRSSRQQGEESSTRRRSSRGTRNGGTSGGGGGGGSGQRYASAAIAAANQAAR 510
                |.||               ...|..||..:...|....|....:|.....||...|....:
Human   117 ----ALTP---------------QHVRAHSSPASLQLGAVSPGTLTPTGVVSGPAATPTAQHLRQ 162

  Fly   511 PFLD------LPPGYEMRTTQQGQVYFYHIPTGVSTWHDPR----------IPRDFDT-QHLTLD 558
            ...:      ||.|:||..|..||.||.:.....:||.|||          .|..... |::...
Human   163 SSFEIPDDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPRKAMLSQMNVTAPTSPPVQQNMMNS 227

  Fly   559 AIGPLPSGWEQRKTASGRVYFVDHNNRTTQFTDPRLSGSILQMIRRGTVPPTSAANAGTPAPPSA 623
            |.||||.||||..|..|.:|:::|.|:||.:.||||.                            
Human   228 ASGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPRLD---------------------------- 264

  Fly   624 TPATPSAAAAVPPQATPASNATPTTLTTTTNPPHRIVPDLPQGLLEGADLLPKYRRDLVGKLRAL 688
                        |:...|.|...:.......|| .:.|..|||.:.|            |.....
Human   265 ------------PRFGKAMNQRISQSAPVKQPP-PLAPQSPQGGVMG------------GSNSNQ 304

  Fly   689 RTELQTMQPQSGHCRLEVSRNEIFEESYRLIMK---------MRAKDMRKRLMVKFKGEEG---- 740
            :.:::..|.|....||.:.:.|:..:.....|:         .:.:::..|..:....::|    
Human   305 QQQMRLQQLQMEKERLRLKQQELLRQVRPQAMRNINPSTANSPKCQELALRSQLPTLEQDGGTQN 369

  Fly   741 -LDYGGVAREWLHLLSREMLNP--QYGLFQYSRDD---------HYTLQINPDSGVN-------- 785
             :...|:::| |..::....:|  ..|.: :|||:         .|::...||..:|        
Human   370 PVSSPGMSQE-LRTMTTNSSDPFLNSGTY-HSRDESTDSGLSMSSYSVPRTPDDFLNSVDEMDTG 432

  Fly   786 ---------------PDHLSYFHFVGRTLGIAVFHGHCLDGGFTTPFYKQLLNKPITLGDIEGV- 834
                           ||:|.........||.....|..::|....|..::.|:..| |.|:|.| 
Human   433 DTINQSTLPSQQNRFPDYLEAIPGTNVDLGTLEGDGMNIEGEELMPSLQEALSSDI-LNDMESVL 496

  Fly   835 ---DPDLHRSLTWM 845
               ..|....|||:
Human   497 AATKLDKESFLTWL 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SmurfNP_001261061.1 C2_Smurf-like 14..135 CDD:176028
WW 169..198 CDD:278809
WW 514..546 CDD:197736 15/47 (32%)
WW 562..594 CDD:197736 16/31 (52%)
HECTc 702..1058 CDD:238033 36/196 (18%)
HECTc 726..1058 CDD:214523 32/163 (20%)
YAP1XP_005271435.1 WW 174..203 CDD:238122 12/28 (43%)
WW 232..261 CDD:366073 13/28 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5021
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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