DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ND-51L1 and Ndufv1

DIOPT Version :9

Sequence 1:NP_611238.2 Gene:ND-51L1 / 36998 FlyBaseID:FBgn0034251 Length:702 Species:Drosophila melanogaster
Sequence 2:NP_598427.1 Gene:Ndufv1 / 17995 MGIID:107851 Length:464 Species:Mus musculus


Alignment Length:438 Identity:326/438 - (74%)
Similarity:378/438 - (86%) Gaps:1/438 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   245 GTPPPQTKTTFGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVNEIKTSGLR 309
            ||..|: ||:||.|.|.||||||||||||||||.|::||||||||||:.||..||:.|:||||||
Mouse    23 GTTAPK-KTSFGSLKDEDRIFTNLYGRHDWRLKGALRRGDWYKTKEILLKGPDWILGEMKTSGLR 86

  Fly   310 GRGGAGFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKLVEGCLIAGRAMGA 374
            ||||||||:|||||||:||.|||||:|||||||||||||||||||||||||||||||:.||||||
Mouse    87 GRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLVEGCLVGGRAMGA 151

  Fly   375 NTGFIYIRGEFYNEACNLQYAIIEAYKAGYLGKNACGSGFDFDLYVQRGAGAYICGEETSLIESL 439
            ...:|||||||||||.|||.||.|||:||.:|||||||.:|||::|.||||||||||||:||||:
Mouse   152 RAAYIYIRGEFYNEASNLQVAIREAYEAGLIGKNACGSDYDFDVFVVRGAGAYICGEETALIESI 216

  Fly   440 EGKAGKPRNKPPFPADIGVFGCPSTVTNVETVAVSPTICRRGGNWFASFGRTRNSGTKLFNISGH 504
            |||.||||.|||||||:||||||:||.||||||||||||||||.|||.|||.|||||||||||||
Mouse   217 EGKQGKPRLKPPFPADVGVFGCPTTVANVETVAVSPTICRRGGTWFAGFGRERNSGTKLFNISGH 281

  Fly   505 VCNPCTVEEEMSMPTRELIERHAGGVIGGWDNLLAIIPGGSSTPCITKEHASSAIHDYDGLMAVR 569
            |.:|||||||||:|.:||||:|||||.||||||||:||||||||.|.|....:.:.|:|.|:..:
Mouse   282 VNHPCTVEEEMSVPLKELIEKHAGGVTGGWDNLLAVIPGGSSTPLIPKSVCETVLMDFDALVQAQ 346

  Fly   570 SSMGTGALIVMNKDTDIIKAIARLSAFYKHESCGQCTPCREGLHWVNMIMHRFVTGQAQIAEIDM 634
            :.:||.|:|||::.|||:||||||..||||||||||||||||:.|:|.:|.|||.|.|:.||||.
Mouse   347 TGLGTAAVIVMDRSTDIVKAIARLIEFYKHESCGQCTPCREGVDWMNKVMARFVKGDARPAEIDS 411

  Fly   635 LFELTKQIEGHTICALADGAAWPPQGLIRNFRPVIEERIKKRAAEDQA 682
            |:|::|||||||||||.||||||.|||||:|||.:|:|:::.|.:.:|
Mouse   412 LWEISKQIEGHTICALGDGAAWPVQGLIRHFRPELEDRMQRFAQQHRA 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ND-51L1NP_611238.2 CAP_N <195..234 CDD:279545
PRK13596 258..688 CDD:237441 319/425 (75%)
Complex1_51K 303..472 CDD:279808 139/168 (83%)
NADH_4Fe-4S 589..670 CDD:287548 60/80 (75%)
Ndufv1NP_598427.1 PRK13596 35..463 CDD:237441 319/425 (75%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167850054
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1894
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S1523
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003103
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101044
Panther 1 1.100 - - O PTHR11780
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X2074
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.650

Return to query results.
Submit another query.