DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP54D and conu

DIOPT Version :10

Sequence 1:NP_611236.2 Gene:RhoGAP54D / 36996 FlyBaseID:FBgn0034249 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_001036454.1 Gene:conu / 3355133 FlyBaseID:FBgn0039994 Length:629 Species:Drosophila melanogaster


Alignment Length:212 Identity:52/212 - (24%)
Similarity:98/212 - (46%) Gaps:34/212 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 MLEKNLTQEGLFRKAGAVSR----QNELRMHIQHDKPLNLE--LAGFSAHDCATVFKGFLSELPE 182
            :|.:...:|||.|..|...:    .|||.... :..|.||:  ....:.|:.:::.|.:|.|||:
  Fly   390 LLRRGSREEGLLRIGGHKQKTELLYNELESTF-YQNPDNLDNLFRTATVHELSSLLKRWLRELPQ 453

  Fly   183 PLLTD----AHYPAHLQIAPLCQALNGQTTATAERQQHLLNSVQLLLLLLPEEHRELLQHIIEML 243
            ||||:    ..|..|             |..:.::    :|::.:|..|||.|:|..|:.::...
  Fly   454 PLLTNELIQLFYQCH-------------TLPSIDQ----MNALSILCHLLPPENRNTLRSLLSFF 501

  Fly   244 HAVAKHEKSNKMSADNLATLFTPHLICPRQLPPEVLHYQAKKM------SSIVTYMIVRGLDIFE 302
            :.:...:..|||:..|:||:..|.:..||.:.|...:..|:::      ..:...:|:||..:|:
  Fly   502 NIIINLKDINKMNVHNVATIMAPSMFPPRYIHPSDNNSIAEQVRMAAQCCRLTNILILRGEKLFQ 566

  Fly   303 VPGKLSTDIRAYFLERK 319
            ||..|..:.:...:.:|
  Fly   567 VPNNLIVESQKTMMGKK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP54DNP_611236.2 RhoGAP 107..313 CDD:470621 51/204 (25%)
conuNP_001036454.1 RhoGAP_ARHGAP18 356..576 CDD:239856 51/203 (25%)

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