DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP54D and ARHGAP45

DIOPT Version :9

Sequence 1:NP_001261060.1 Gene:RhoGAP54D / 36996 FlyBaseID:FBgn0034249 Length:1004 Species:Drosophila melanogaster
Sequence 2:XP_011526160.1 Gene:ARHGAP45 / 23526 HGNCID:17102 Length:1168 Species:Homo sapiens


Alignment Length:384 Identity:96/384 - (25%)
Similarity:155/384 - (40%) Gaps:98/384 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 LTQEGLFRKAGAVSRQNELRMHIQHDKPLNLELAGFSAHDCATVFKGFLSELPEPLLTDAHYPAH 193
            |..:|::|..|..:|..:|....::.|.| :||:..|.||.:.|.|.:|.:|||||::...|  |
Human   822 LRTKGIYRVNGVKTRVEKLCQAFENGKEL-VELSQASPHDISNVLKLYLRQLPEPLISFRLY--H 883

  Fly   194 LQIAPLCQALNGQTTATAE---RQQ---------HLLNSVQLLLLLLPEEHRELLQHIIEMLHAV 246
            ..:.....:|..:..|.|.   ||.         .|...::.||..||.|:|..||:::..|..:
Human   884 ELVGLAKDSLKAEAEAKAASRGRQDGSESEAVAVALAGRLRELLRDLPPENRASLQYLLRHLRRI 948

  Fly   247 AKHEKSNKMSADNLATLFTPHLICPRQLPPEVLHYQAKKMSSIVTY---------MIVR-GLDIF 301
            .:.|:.|||:..||..:|.|.|:.||  |.|.    ...:||:|.|         :||. || :|
Human   949 VEVEQDNKMTPGNLGIVFGPTLLRPR--PTEA----TVSLSSLVDYPHQARVIETLIVHYGL-VF 1006

  Fly   302 EVPGKLSTDIRAYFLERKRKKTMSPEQT---LDESISDVSTV-----------NTVYTFVDRAAT 352
            |                     ..||:|   .|||.:..:.|           ..||...:.||.
Human  1007 E---------------------EEPEETPGGQDESSNQRAEVVVQVPYLEAGEAVVYPLQEAAAD 1050

  Fly   353 AAATN---TNNTDTELAQLYAHIQSMPESSKKRRLIKQFNKQNGQGTPLQLVVMNRLKNNEATR- 413
            ....:   :|::|::|.:. :.:.|..|:|....|  .|.:|......|::...:...:.|... 
Human  1051 GCRESRVVSNDSDSDLEEA-SELLSSSEASALGHL--SFLEQQQSEASLEVASGSHSGSEEQLEA 1112

  Fly   414 SAKSLGDSIKKHIFHKSLMSRTPKRVPPSFHLASGSETPNMSHVKPPKMRVLFQSPTPP 472
            :|:..||..:.               .|:..| ||..|...::|        .|:|.||
Human  1113 TAREDGDGDED---------------GPAQQL-SGFNTNQSNNV--------LQAPLPP 1147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP54DNP_001261060.1 RhoGAP 107..313 CDD:295372 61/205 (30%)
ARHGAP45XP_011526160.1 FCH 285..360 CDD:214492
C1 734..779 CDD:197519
RhoGAP 791..1001 CDD:295372 56/187 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1453
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.