DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP54D and Arhgap29

DIOPT Version :10

Sequence 1:NP_611236.2 Gene:RhoGAP54D / 36996 FlyBaseID:FBgn0034249 Length:1004 Species:Drosophila melanogaster
Sequence 2:NP_766113.1 Gene:Arhgap29 / 214137 MGIID:2443818 Length:1266 Species:Mus musculus


Alignment Length:720 Identity:141/720 - (19%)
Similarity:255/720 - (35%) Gaps:218/720 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 TMDTDHANLNDFRDRDLATRMRRCNYEKYKSLVRMHLSFELELNTDEFDLPCHEIVYED------ 62
            |:.:..|..:.||.....|:.|.|:.      :.|....|.|    |..|.||....|:      
Mouse   606 TLMSKAALTHKFRKLRSPTKCRDCDG------IVMFPGVECE----ECLLVCHRKCLENLVIICG 660

  Fly    63 ----KGKL----KKWNRLSKKHRLGHGAAATSCAAGSASKSV---------GNS-PTETLQQQID 109
                :||:    .::.:::||...|.......||:...::::         ||. .||.|.|.::
Mouse   661 HQKLQGKMHIFGAEFIQVAKKEPDGIPFVLKICASEIENRALCLQGIYRVCGNKIKTEKLCQALE 725

  Fly   110 PGFLMHLQELKEFLMLEKNLTQEGLFRKAGAVSRQNELRMHIQHDKPLNLELAGFSAHDCATVFK 174
            .|  |||.::.|                                          ||:||...|.|
Mouse   726 NG--MHLVDISE------------------------------------------FSSHDICDVLK 746

  Fly   175 GFLSELPEPLLTDAHYPAHLQIAPLCQALNGQTTA---TAERQQHLLNSVQL---------LLLL 227
            .:|.:||||.:....|...:.:|...|.:|.:..|   :.|.::|...|:::         ||..
Mouse   747 LYLRQLPEPFILFRLYKEFIDLAKEIQHVNEEQEAKKDSPEDKKHPHVSIEVNRILLKSKDLLRQ 811

  Fly   228 LPEEHRELLQHIIEMLHAVAKHEKSNKMSADNLATLFTPHLICPRQLPPEVLHYQAKKMSS---I 289
            ||..|...|.::|..|..|..|.:.|||::.||..:|.|.||.||.....|......:.|:   :
Mouse   812 LPASHFNSLHYLIAHLRRVVDHAEENKMNSKNLGVIFGPTLIRPRPTTAPVTISSLAEYSNQARL 876

  Fly   290 VTYMIVRGLDIFEVPGKLSTDIRAYFLERKRKKTMSPEQTLDESISDVSTVNTVYTFVDRA---A 351
            |.::|.....||:                   .::.|:..:      :|....|...||:.   .
Mouse   877 VEFLITYSQKIFD-------------------GSLQPQAVV------ISNTGAVAPQVDQGYLPK 916

  Fly   352 TAAATNTNNTDTELAQLY----AHIQSMPESSKKRRLIKQF----NKQNGQG---TPLQLVVMNR 405
            ...:.:..:||..:..|:    ..|:|....||...|...|    .:||..|   .||....::.
Mouse   917 PLLSPDERDTDHSMKPLFFSSKEDIRSSDCESKSFELTTSFEESERRQNALGKCDAPLLDNKVHL 981

  Fly   406 LKNNEATRSAKSLGDSIKKHIFHKSLMSRTPKRVPPSFHLASGS---ETP--NMSHVKPPKMRVL 465
            |.:.|...:::.:.|           :.::||.:....:.|:.|   .||  .|..|..|..|:|
Mouse   982 LFDQEHESASQKMED-----------VCKSPKLLLLKSNRAANSVQRHTPRTKMRPVSLPVDRLL 1035

  Fly   466 FQSPTPPTPTSSTITSVSL----------------STNT---------RHQLQKS---------- 495
            ..:.:|...:|..:.:|..                ::||         :..:|||          
Mouse  1036 LLASSPTERSSRDVGNVDSDKFGKNPAFEGLHRKDNSNTTRSKVNGFDQQNVQKSWDTQYVRNNF 1100

  Fly   496 ISSASLKIESSSSDSSSSCATSGSISAPVSRQQSKESPSGNGAAGASGQELDEIDADCCVTPLKI 560
            .:..::.:.|:..:...:..|..:...|.|:..::       .|.|:|...:...:|.|  |...
Mouse  1101 TAKTTMIVPSAYPEKGLTVNTGNNRDHPGSKAHAE-------PARAAGDVSERRSSDSC--PATA 1156

  Fly   561 MSAVAKQLIDKKSVAWDEHRLLEIEEYS------NPSTPVQQSTRYKSEPNLS--SIL---PQVD 614
            :.|               .|.|:.:.::      ||:..|:.:....:.|:::  .:|   ||:.
Mouse  1157 VRA---------------PRTLQPQHWTTFYKPPNPTFSVRGTEEKTALPSIAVPPVLVHAPQIH 1206

  Fly   615 AEEED 619
            ..:.|
Mouse  1207 VTKSD 1211

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP54DNP_611236.2 RhoGAP 107..313 CDD:470621 51/220 (23%)
Arhgap29NP_766113.1 BAR 220..436 CDD:472257
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..501
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 542..601
C1_GMIP-like 613..663 CDD:410366 13/59 (22%)
RhoGAP 671..883 CDD:470621 60/255 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1039..1081 5/41 (12%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1116..1157 9/49 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1209..1266 1/3 (33%)
Interaction with PTPN13/PTPL1. /evidence=ECO:0000250 1263..1266
Blue background indicates that the domain is not in the aligned region.

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