DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6484 and ITR1

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_010785.1 Gene:ITR1 / 852108 SGDID:S000002905 Length:584 Species:Saccharomyces cerevisiae


Alignment Length:483 Identity:137/483 - (28%)
Similarity:232/483 - (48%) Gaps:40/483 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LPQYIAGLS--ASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFG---WVSSLLTLGATVI 66
            |..:|..|:  ||......|...|:.|..  :|::.|:....:.:  :|   .|::..:|||.:.
Yeast    82 LSPFIITLTFVASISGFMFGYDTGYISSA--LISIGTDLDHKVLT--YGEKEIVTAATSLGALIT 142

  Fly    67 CIPIGFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEI 131
            .|..|.|.|..||:..::.....:::|.:|.:.|.....:..||.|:|...|...:.||::.:||
Yeast   143 SIFAGTAADIFGRKRCLMGSNLMFVIGAILQVSAHTFWQMAVGRLIMGFGVGIGSLIAPLFISEI 207

  Fly   132 TATALRGTIGSFFQLLIVSGVLYGYLVGAFLPLLT----INILCAILP--VIFAIIHFFMPESPV 190
            ....:||.:.....|.:..|.|..|..||.|..:.    |.:..:::|  |.|..: .|:|::|.
Yeast   208 APKMIRGRLTVINSLWLTGGQLVAYGCGAGLNYVNNGWRILVGLSLIPTAVQFTCL-CFLPDTPR 271

  Fly   191 YLAMKGRNDDAAKALQWLRGKDADIDDELKE-------ILEESQKQIDMPQV--NILSSLRR-PI 245
            |..|||   |.|:|.:.|:....|..:|:.|       .|.:|....::|:.  |.:..|.. |.
Yeast   272 YYVMKG---DLARATEVLKRSYTDTSEEIIERKVEELVTLNQSIPGKNVPEKVWNTIKELHTVPS 333

  Fly   246 VLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSDATLIIGVTQVTSTLVAVAIIDKA 310
            .|:.|.|...||..||:||.|:::::|.:|||..|.. :.|..::|:..|....||||...|||.
Yeast   334 NLRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFK-NSSAVSIIVSGTNFIFTLVAFFSIDKI 397

  Fly   311 GRRILLLIS--GVLMAVSTALMGVYFQLKENDPA-------SMDNFGWLPISSICIFIIFFSIGF 366
            |||.:|||.  |:.||:....:..:|...:.|.|       ...::|.:.|..|.:|..|:::|.
Yeast   398 GRRTILLIGLPGMTMALVVCSIAFHFLGIKFDGAVAVVVSSGFSSWGIVIIVFIIVFAAFYALGI 462

  Fly   367 GPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIAFFY 431
            |.||| ..:|||.::|:.:..|.|..:||..:.|:...|..:..:|.|..||..|..::.::..:
Yeast   463 GTVPW-QQSELFPQNVRGIGTSYATATNWAGSLVIASTFLTMLQNITPAGTFAFFAGLSCLSTIF 526

  Fly   432 SLFFVPETKGKTIIEIQDLLSGGKGVKS 459
            ..|..||..|..:.|:|.:|..|..:|:
Yeast   527 CYFCYPELSGLELEEVQTILKDGFNIKA 554

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 132/466 (28%)
MFS 14..436 CDD:119392 127/451 (28%)
ITR1NP_010785.1 MFS_HMIT_like 92..533 CDD:340918 126/450 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342254
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 168 1.000 Inparanoid score I1021
Isobase 1 0.950 - 0 Normalized mean entropy S2521
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13428
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.740

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