DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6484 and VBA3

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_009864.1 Gene:VBA3 / 850290 SGDID:S000000574 Length:458 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:94/503 - (18%)
Similarity:161/503 - (32%) Gaps:172/503 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 VSSLLTLGATVICIPIGFAIDWIGRRPTML----------ALIPPYMVGWVLMLFAKNVTMLYFG 109
            |:|:...|...:|..||..:.....||.::          |::.|.:.|    .|..:||..:..
Yeast    10 VASVGGSGLQTLCFVIGCTMVGERSRPLVISILSCAFAVAAIVGPIIGG----AFTTHVTWRWCF 70

  Fly   110 RFILGMCGGAFCVTAPMYCTEITATALR-----GTIGSF----------FQLLIVSGVLYGY--- 156
            ...|.:.|.|..:....|..|......:     |||.||          |:.| ::|:::.:   
Yeast    71 YINLPIGGLAIIMFLLTYKAENKGILQQIKDAIGTISSFTFSKFRHQVNFKRL-MNGIIFKFDFF 134

  Fly   157 ---LVGAFLPLLTIN------------------ILCAILPVIFAIIHFFMPESPVYLAMKGRNDD 200
               |..|.|.|..:.                  ::..:|..||::::.|.               
Yeast   135 GFALCSAGLVLFLLGLTFGGNKYSWNSGQVIAYLVLGVLLFIFSLVYDFF--------------- 184

  Fly   201 AAKALQWLRGKDADIDDELKEILEESQKQIDMPQVNILSSLRRPIVLKGLGIAVLLQVFQQWTGI 265
                                 :.::...:.|  .::....|.|.:|.|...|.:.:..|...||.
Yeast   185 ---------------------LFDKFNPEPD--NISYRPLLLRRLVAKPAIIIINMVTFLLCTGY 226

  Fly   266 NAVLFYSASIFEDTGSDISGSDA------TLIIGVTQVTSTLVAVAIIDKAGR-RILLLISGVLM 323
            |..:.||...|:    .|..|.|      .:.|.:|.|.:.:.:..|..|.|. :.||:..|||.
Yeast   227 NGQMIYSVQFFQ----LIFASSAWKAGLHLIPIVITNVIAAIASGVITKKLGLVKPLLIFGGVLG 287

  Fly   324 AVSTALMGVYFQLKENDPASMDNFGWLPISSICIFIIFFSIGFGPVPWLVMAEL----------- 377
            .:...||    .|..|........|.|.:..       ||:||.....|:.|:|           
Yeast   288 VIGAGLM----TLMTNTSTKSTQIGVLLLPG-------FSLGFALQASLMSAQLQITKDRPEAAM 341

  Fly   378 -------FSEDVKSVAGSIAGTSNWLSAFVVTLLF--PILKSSIGP--GPT-------------- 417
                   |:..:||:..::.|.   ||..|.:..|  .:.::.:.|  |.|              
Yeast   342 DFIEVTAFNTFMKSLGTTLGGV---LSTTVFSASFHNKVSRAHLEPYEGKTVDDMILYRLQNYDG 403

  Fly   418 ----------------FWIFTAIAVIAFFYSLFFVPETKGKTIIEIQD 449
                            ||:......:.|.:..|   .:..|.||..:|
Yeast   404 SHSTIGNILSDSIKNVFWMDLGFYALGFLFCSF---SSNKKLIIPKKD 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 94/503 (19%)
MFS 14..436 CDD:119392 90/488 (18%)
VBA3NP_009864.1 MFS <1..369 CDD:421695 81/419 (19%)
MFS <1..>181 CDD:421695 34/175 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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