DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and ERD6

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001031006.1 Gene:ERD6 / 837414 AraportID:AT1G08930 Length:496 Species:Arabidopsis thaliana


Alignment Length:461 Identity:147/461 - (31%)
Similarity:239/461 - (51%) Gaps:45/461 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIAGLSASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFGWVSSLLTLGATVICIPIGFAI 74
            :::...|..|:.|.|..:|:||..:..||.:    ..:|.:::....|:||||..:..:..|...
plant    59 FLSTFVAVSGSFCTGCGVGFSSGAQAGITKD----LSLSVAEYSMFGSILTLGGLIGAVFSGKVA 119

  Fly    75 DWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATALRGT 139
            |.:||:.|||......:.||:.:..|:|...|..||.:||:..|.|....|:|..||....:||:
plant   120 DVLGRKRTMLFCEFFCITGWLCVALAQNAMWLDCGRLLLGIGVGIFSYVIPVYIAEIAPKHVRGS 184

  Fly   140 IGSFFQLLIVSGVLYGYLVGAFLP--LLTINILCAILPVIFAII-HFFMPESPVYLAMKGRNDDA 201
            .....||:...|:...:::|.|:|  |||:   ..::|.:|.:. .||:||||.:||..||:.:.
plant   185 FVFANQLMQNCGISLFFIIGNFIPWRLLTV---VGLVPCVFHVFCLFFIPESPRWLAKLGRDKEC 246

  Fly   202 AKALQWLRGKDADIDDELKEILEESQKQIDMPQ---VNILSSL--RR---PIVLKGLGIAVLLQV 258
            ..:||.|||.|.||..|...|    :..|||.:   ...:|.|  ||   |::: |:|:..|   
plant   247 RSSLQRLRGSDVDISREANTI----RDTIDMTENGGETKMSELFQRRYAYPLII-GVGLMFL--- 303

  Fly   259 FQQWTGINAVLFYSASIFEDTGSDISGSDATLIIGVTQVTSTLVAVAIIDKAGRRILLLISGVLM 323
             ||..|.:.|.:|::|:|...|  ...:..|.:|....|...::|..::||.|||.||:.|...|
plant   304 -QQLCGSSGVTYYASSLFNKGG--FPSAIGTSVIATIMVPKAMLATVLVDKMGRRTLLMASCSAM 365

  Fly   324 AVSTALMGVYFQLKENDPASMDNFGWLP-ISSI--CI----FIIFFSIGFGPVPWLVMAELFSED 381
            .:|..|:.|.:        ...:||.|| ::.|  ||    .|:.|::|.|.:||::|||:|..:
plant   366 GLSALLLSVSY--------GFQSFGILPELTPIFTCIGVLGHIVSFAMGMGGLPWIIMAEIFPMN 422

  Fly   382 VKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIAFFYSLFFVPETKGKTIIE 446
            ||..||::...:|||..:::|..|..:......| .|.||:.::..:..:..|.||||||:::.|
plant   423 VKVSAGTLVTVTNWLFGWIITYTFNFMLEWNASG-MFLIFSMVSASSIVFIYFLVPETKGRSLEE 486

  Fly   447 IQDLLS 452
            ||.||:
plant   487 IQALLN 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 145/454 (32%)
MFS 14..436 CDD:119392 136/439 (31%)
ERD6NP_001031006.1 MFS_GLUT6_8_Class3_like 59..486 CDD:340916 142/453 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 1 1.000 - - FOG0000275
OrthoInspector 1 1.000 - - mtm972
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.