DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and PMT6

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_195385.1 Gene:PMT6 / 829820 AraportID:AT4G36670 Length:493 Species:Arabidopsis thaliana


Alignment Length:482 Identity:140/482 - (29%)
Similarity:228/482 - (47%) Gaps:43/482 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LSASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFGWVSSLLTLGATVICIPIGFAIDWIG 78
            |..:..|..:....|:.:.|.:...|..|.....:..|...::.:|.|.|.|..:..|...|.||
plant    18 LQCAIVASIVSIIFGYDTGVMSGAMVFIEEDLKTNDVQIEVLTGILNLCALVGSLLAGRTSDIIG 82

  Fly    79 RRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATALRGTIGSF 143
            ||.|::.....:|:|.:||.:..|..:|..||...|:..|...:.||:|..||...:.||.:.|.
plant    83 RRYTIVLASILFMLGSILMGWGPNYPVLLSGRCTAGLGVGFALMVAPVYSAEIATASHRGLLASL 147

  Fly   144 FQLLIVSGVLYGYLVGAFLPLLTINI-------LCAILPVIFAIIHFFMPESPVYLAMKGRNDDA 201
            ..|.|..|:|.||:|..|...|.::|       :.|:..::.|.....|||||.:|.|:||..:.
plant   148 PHLCISIGILLGYIVNYFFSKLPMHIGWRLMLGIAAVPSLVLAFGILKMPESPRWLIMQGRLKEG 212

  Fly   202 AKALQW---------LRGKD----ADIDDE-LKEILEESQKQIDMPQVNILSSLR-----RPIVL 247
            .:.|:.         ||.:|    |.||.: :.::::...|:.....|.....||     |.::|
plant   213 KEILELVSNSPEEAELRFQDIKAAAGIDPKCVDDVVKMEGKKTHGEGVWKELILRPTPAVRRVLL 277

  Fly   248 KGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSD----ATLIIGVTQVTSTLVAVAIID 308
            ..|||    ..||..:||.|||.|...||:..|  |:..|    .|:.:|:.:.|....|..::|
plant   278 TALGI----HFFQHASGIEAVLLYGPRIFKKAG--ITTKDKLFLVTIGVGIMKTTFIFTATLLLD 336

  Fly   309 KAGRRILLLISGVLMAVSTALMGVYFQLKENDPASMDNFGWLPISSICI---FIIFFSIGFGPVP 370
            |.|||.|||.|...|.::..::|....:.:|....:   .|..:.||..   |:.|||||.||:.
plant   337 KVGRRKLLLTSVGGMVIALTMLGFGLTMAQNAGGKL---AWALVLSIVAAYSFVAFFSIGLGPIT 398

  Fly   371 WLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIAFFYSLFF 435
            |:..:|:|...:::...|:....|.:....|::.|..|.|:|..|..|::|..:|.:|:.:..|.
plant   399 WVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWNFFFFL 463

  Fly   436 VPETKGKTIIEIQDLLS-GGKGVKSDD 461
            :||||||::.||:.|.. .|..|:.::
plant   464 LPETKGKSLEEIEALFQRDGDKVRGEN 490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 137/469 (29%)
MFS 14..436 CDD:119392 129/454 (28%)
PMT6NP_195385.1 Sugar_tr 20..479 CDD:278511 136/467 (29%)
MFS 22..463 CDD:119392 127/449 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.