DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and TMT2

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001190923.1 Gene:TMT2 / 829684 AraportID:AT4G35300 Length:739 Species:Arabidopsis thaliana


Alignment Length:742 Identity:137/742 - (18%)
Similarity:237/742 - (31%) Gaps:306/742 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 GSVLPQYIAGLSASFGALCMGASIGWSSP--VENMITVNTEYGFPISSSQFGWVSSLLTLGATVI 66
            |:||    ..::|:.|.|..    ||.:.  ...::.:..|:....:.|..|.:.::..:|||:|
plant     3 GAVL----VAIAAAVGNLLQ----GWDNATIAGAVLYIKKEFNLESNPSVEGLIVAMSLIGATLI 59

  Fly    67 CIPIGFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEI 131
            ....|...||:||||.::.....|.||.::||::.||.:|..||.:.|...|......|:|.:|.
plant    60 TTCSGGVADWLGRRPMLILSSILYFVGSLVMLWSPNVYVLLLGRLLDGFGVGLVVTLVPIYISET 124

  Fly   132 TATALRGTIGSFFQLLIVSGVLYGYLVGAFLPL-------LTINILCAILPVIFAIIHFFMPESP 189
            ....:||.:.:..|.....|:...|.:...:.|       |.:.:|.....|.|.:..||:||||
plant   125 APPEIRGLLNTLPQFTGSGGMFLSYCMVFGMSLMPSPSWRLMLGVLFIPSLVFFFLTVFFLPESP 189

  Fly   190 VYLAMKGRNDDAAKALQWLRGKDADIDDEL-----------------------KEILEESQKQID 231
            .:|..|||..:|.:.||.|||:: |:..|:                       .|:.::....:|
plant   190 RWLVSKGRMLEAKRVLQRLRGRE-DVSGEMALLVEGLGIGGETTIEEYIIGPADEVTDDHDIAVD 253

  Fly   232 MPQVNI------LSSLRRPI--------------------------------------------- 245
            ..|:.:      ||.:.||:                                             
plant   254 KDQIKLYGAEEGLSWVARPVKGGSTMSVLSRHGSTMSRRQGSLIDPLVTLFGSVHEKMPDTGSMR 318

  Fly   246 ----------------------------------------------------------------- 245
                                                                             
plant   319 SALFPHFGSMFSVGGNQPRHEDWDEENLVGEGEDYPSDHGDDSEDDLHSPLISRQTTSMEKDMPH 383

  Fly   246 ----------------------------------------------------------------- 245
                                                                             
plant   384 TAHGTLSTFRHGSQVQGAQGEGAGSMGIGGGWQVAWKWTEREDESGQKEGGFKRIYLHQEGFPGS 448

  Fly   246 ----------------------------------------------------------------- 245
                                                                             
plant   449 RRGSIVSLPGGDGTGEADFVQASALVSQPALYSKDLLKEHTIGPAMVHPSETTKGSIWHDLHDPG 513

  Fly   246 VLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTG-------SDISGSDATLIIGV----TQVTS 299
            |.:.|.:.|.||:.||::|||.||:|:..|.|..|       ..||.|.|:|:|..    ..:.:
plant   514 VKRALVVGVGLQILQQFSGINGVLYYTPQILEQAGVGILLSNMGISSSSASLLISALTTFVMLPA 578

  Fly   300 TLVAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKENDPASMDNFGWLPIS--SICIFIIFF 362
            ..||:.::|.:|||.|||.:..::..|..::.:      ::...|::.....:|  |:.::..||
plant   579 IAVAMRLMDLSGRRTLLLTTIPILIASLLVLVI------SNLVHMNSIVHAVLSTVSVVLYFCFF 637

  Fly   363 SIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVI 427
            .:||||.|.::.:|:|...|:.:..:|...:.|:...:||...|:|..|||....|.::..:..|
plant   638 VMGFGPAPNILCSEIFPTRVRGICIAICALTFWICDIIVTYSLPVLLKSIGLAGVFGMYAIVCCI 702

  Fly   428 AFFYSLFFVPETKGKTIIEIQDLLSGG 454
            ::.:....||||||..:..|.:..|.|
plant   703 SWVFVFIKVPETKGMPLEVITEFFSVG 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 132/727 (18%)
MFS 14..436 CDD:119392 125/712 (18%)
TMT2NP_001190923.1 MFS 14..>174 CDD:421695 41/163 (25%)
MFS <516..713 CDD:421695 56/202 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.000

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