DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and TMT3

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001190054.1 Gene:TMT3 / 824312 AraportID:AT3G51490 Length:737 Species:Arabidopsis thaliana


Alignment Length:741 Identity:136/741 - (18%)
Similarity:238/741 - (32%) Gaps:308/741 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IAGLSASFGALCMGASIGWSSP--VENMITVNTEYGFPISSSQFGWVSSLLTLGATVICIPIGFA 73
            :..|:|:.|.:..    ||.:.  ...:|.:..|:.........|.:.::..:|||:|....|..
plant     6 LVALAAAIGNMLQ----GWDNATIAGAVIYIKKEFHLEKEPKIEGLIVAMSLIGATLITTFSGPV 66

  Fly    74 IDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATALRG 138
            .|.:|||..::.....|.:..::|.::.||.:|.|.|.:.|...|......|:|.:|...:.:||
plant    67 SDKVGRRSMLILSSVLYFLSSIVMFWSPNVYVLLFARLLDGFGIGLAVTLVPIYISETAPSEIRG 131

  Fly   139 TIGSFFQLLIVSGVLYGYLVGAFLPL-------LTINILCAILPVIFAIIHFFMPESPVYLAMKG 196
            .:.:|.|.....|:...|.:...:.|       |.:.:|.......|.:..||:||||.:|..||
plant   132 LLNTFPQFCGSGGMFLSYCLVFGMSLQESPSWRLMLGVLSIPSIAYFVLAAFFLPESPRWLVSKG 196

  Fly   197 RNDDAAKALQWLRGKDADIDDELKEILE------------------------------------- 224
            |.|:|.:.||.|||:: |:..||..::|                                     
plant   197 RMDEARQVLQRLRGRE-DVSGELALLVEGLGVGKDTSIEEYVIGPDNEENEGGNELPRKDQIKLY 260

  Fly   225 ----------------------------------------------------------------- 224
                                                                             
plant   261 GPEDGQSWMAKPVKGQSSLALASRQGSMLPRGGSLMDPLVTLFGSIHENLPSENMNASSRSMLFP 325

  Fly   225 ------------ESQ--------------KQIDMP------------------------------ 233
                        |||              :.::.|                              
plant   326 NMGSILGMMGRQESQWDPERNNEDSSDQDENLNSPLLSPQTTEPDDYHQRTVGTMHRRQSSLFMA 390

  Fly   234 ----------------------------------------------------------------- 233
                                                                             
plant   391 NVGETATATSIGGGWQLAWKYNDKVGADGKRVNGGLQRMYIHEETANNNTNNIPFSRRGSLLSFH 455

  Fly   234 -------QVN-------ILS--------------------------SLRRPIVLKGLGIAVLLQV 258
                   |||       ::|                          .|:.|.|.:.|.:.|.||:
plant   456 PEGDGHDQVNGYVQAAALVSQASMMPGGKGETAMLPKEVKDGPGWRELKEPGVKRALMVGVGLQI 520

  Fly   259 FQQWTGINAVLFYSASIFEDTGSD-------ISGSDATLIIG----VTQVTSTLVAVAIIDKAGR 312
            .||:.|||.|::|:..|.|:||..       ||...|:|:|.    :..:...||::.::|..||
plant   521 LQQFAGINGVMYYTPQILEETGVSSLLTNLGISAESASLLISALTTLLMLPCILVSMRLMDVTGR 585

  Fly   313 RILLL--ISGVLMAVSTALMGVYFQLKENDPASMDNFG-----WLPISSICIFIIFFSIGFGPVP 370
            |.|:|  |..:::::.|.::|           |:.|.|     .:..:|:.:::..|.:|||.:|
plant   586 RSLMLSTIPILILSLVTLVIG-----------SLVNLGGSINALISTASVTVYLSCFVMGFGAIP 639

  Fly   371 WLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIAFFYSLFF 435
            .::.:|:|...|:.:..:|...:.|:...:||...|::..|||....|.|:..:..:|:.:....
plant   640 NILCSEIFPTSVRGLCITICALTFWICDIIVTYTLPVMLKSIGIAGVFGIYAIVCAVAWVFVYLK 704

  Fly   436 VPETKGKTIIEIQDLLSGGKGVKSDD 461
            ||||||..:..|.:..|  .|.|..|
plant   705 VPETKGMPLEVISEFFS--VGAKQQD 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 132/726 (18%)
MFS 14..436 CDD:119392 125/711 (18%)
TMT3NP_001190054.1 MFS 9..>186 CDD:119392 41/180 (23%)
MFS <512..703 CDD:119392 54/201 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR48021
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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