DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG6484 and STP4

DIOPT Version :9

Sequence 1:	NP_611234.1	Gene:	CG6484 / 36994	FlyBaseID:	FBgn0034247	Length:	465	Species:	Drosophila melanogaster
Sequence 2:	NP_001326818.1	Gene:	STP4 / 821531	AraportID:	AT3G19930	Length:	514	Species:	Arabidopsis thaliana

Alignment Length:	475	Identity:	134/475 - (28%)
Similarity:	224/475 - (47%)	Gaps:	52/475 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    10 YIAGLSASFGALCMGASIGWSSPVENMITVNTEYGFPI---------SSSQFGWVSSLLTL---- 61
            ::.....:||.|..|..:|.|..|.:|.....|: ||.         .:....:.|.||||
plant    24 FVTCFIGAFGGLIFGYDLGISGGVTSMEPFLEEF-FPYVYKKMKSAHENEYCRFDSQLLTLFTSS 87

  Fly    62 ---GATVICIPIGFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVT 123
               .|.|..:.........||:.:|......:.:|.....||:|:.||..||.:||...|....:
plant    88 LYVAALVSSLFASTITRVFGRKWSMFLGGFTFFIGSAFNGFAQNIAMLLIGRILLGFGVGFANQS 152

  Fly   124 APMYCTEITATALRGTIGSFFQLLIVSGVLYGYLVGAFLPLLTINI-------LCAILPVIFAII 181
            .|:|.:|:....|||...:.||:.|:.|::...::..|...:..||       |..:..|:..|.
plant   153 VPVYLSEMAPPNLRGAFNNGFQVAIIFGIVVATIINYFTAQMKGNIGWRISLGLACVPAVMIMIG 217

  Fly   182 HFFMPESPVYLAMKGRNDDAAKALQWLRGKDADIDDELKEILE--ESQKQIDMPQVNILSSLRRP 244
            ...:|::|..|..:|..::|.:.||.:||.: ::|:|.:::::  |..||:..|..||:....||
plant   218 ALILPDTPNSLIERGYTEEAKEMLQSIRGTN-EVDEEFQDLIDASEESKQVKHPWKNIMLPRYRP 281

  Fly   245 IVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSDATL----IIGVTQVTSTLVAVA 305
            .::    :...:..|||.||||.:.||:..:|:..|   .||.|:|    :.|:.::..|.|:|.
plant   282 QLI----MTCFIPFFQQLTGINVITFYAPVLFQTLG---FGSKASLLSAMVTGIIELLCTFVSVF 339

  Fly   306 IIDKAGRRILLLISGVLMAVST----ALMGVYFQLKENDPASMDNFGW----LPISSICIFIIFF 362
            .:|:.|||||.|..|:.|.||.    |::||.|.:     |...|.|.    |.::.|||::..|
plant   340 TVDRFGRRILFLQGGIQMLVSQIAIGAMIGVKFGV-----AGTGNIGKSDANLIVALICIYVAGF 399

  Fly   363 SIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVI 427
            :..:||:.|||.:|:...:::|.|.:|..:.|....|:|..||..:...:..| .|:.|....||
plant   400 AWSWGPLGWLVPSEISPLEIRSAAQAINVSVNMFFTFLVAQLFLTMLCHMKFG-LFFFFAFFVVI 463

  Fly   428 AFFYSLFFVPETKGKTIIEI 447
            ...:....:||||...|.|:
plant   464 MTIFIYLMLPETKNVPIEEM 483

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG6484	NP_611234.1	Sugar_tr	14..451	CDD:278511	134/471 (28%)
CG6484	NP_611234.1	MFS	14..436	CDD:119392	128/458 (28%)
STP4	NP_001326818.1	MFS_STP	29..474	CDD:340919	128/459 (28%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0254
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D430696at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	1	1.000	-	-		X26
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	3.820