DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and PMT5

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_188513.1 Gene:PMT5 / 821416 AraportID:AT3G18830 Length:539 Species:Arabidopsis thaliana


Alignment Length:503 Identity:151/503 - (30%)
Similarity:250/503 - (49%) Gaps:59/503 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SVLP---------QYIAGLSASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFGWVSSLLT 60
            ||||         .:...:.||..::.:|..||..|..  ||.:..:  ..|:..|.|.::..|.
plant    23 SVLPAKPPKRNNYAFACAILASMTSILLGYDIGVMSGA--MIYIKRD--LKINDLQIGILAGSLN 83

  Fly    61 LGATVICIPIGFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAP 125
            :.:.:.....|...||||||.|::.....:..|.:||..:.|...|.|||||.|:..|...:.||
plant    84 IYSLIGSCAAGRTSDWIGRRYTIVLAGAIFFAGAILMGLSPNYAFLMFGRFIAGIGVGYALMIAP 148

  Fly   126 MYCTEITATALRGTIGSFFQLLIVSGVLYGYLVG-AF--LPL-----LTINILCAILPVIFAIIH 182
            :|..|::..:.||.:.||.::.|.:|::.||:.. ||  |||     |.:.| .|:..||.||..
plant   149 VYTAEVSPASSRGFLNSFPEVFINAGIMLGYVSNLAFSNLPLKVGWRLMLGI-GAVPSVILAIGV 212

  Fly   183 FFMPESPVYLAMKGRNDDAAKALQWLRGKDADIDDELKEILEESQKQIDMP---QVNILSSLRR- 243
            ..|||||.:|.|:||..||.:.|.    |.:|...|....||:.:....:|   ..:::...|| 
plant   213 LAMPESPRWLVMQGRLGDAKRVLD----KTSDSPTEATLRLEDIKHAAGIPADCHDDVVQVSRRN 273

  Fly   244 ---------------PIVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTG--SDISGSDATLI 291
                           |.|.:.:..|:.:..|||.:||:||:.:|..||:..|  :|.....||:.
plant   274 SHGEGVWRELLIRPTPAVRRVMIAAIGIHFFQQASGIDAVVLFSPRIFKTAGLKTDHQQLLATVA 338

  Fly   292 IGVTQVTSTLVAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKENDPASMDNFGW---LPIS 353
            :||.:.:..|||..::|:.|||.|||.|...|.:|.|.:|....:.:.   |.....|   :.|:
plant   339 VGVVKTSFILVATFLLDRIGRRPLLLTSVGGMVLSLAALGTSLTIIDQ---SEKKVMWAVVVAIA 400

  Fly   354 SICIFIIFFSIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTF 418
            ::..::..||||.||:.|:..:|:|...::|...|:....|.:::.|:::.|..:..::..|..|
plant   401 TVMTYVATFSIGAGPITWVYSSEIFPLRLRSQGSSMGVVVNRVTSGVISISFLPMSKAMTTGGAF 465

  Fly   419 WIFTAIAVIA--FFYSLFFVPETKGKTIIEIQDLLSGGKGVKSDDKSQ 464
            ::|..||.:|  |||:  |:|||:|:.:.::.:|.||.:.  .|.||:
plant   466 YLFGGIATVAWVFFYT--FLPETQGRMLEDMDELFSGFRW--RDSKSK 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 141/470 (30%)
MFS 14..436 CDD:119392 136/455 (30%)
PMT5NP_188513.1 MFS_PLT 42..494 CDD:340995 141/465 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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