DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and PMT1

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:477 Identity:132/477 - (27%)
Similarity:224/477 - (46%) Gaps:51/477 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIAGLSASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFGWVSSLLTLGATVICIPIGFAI 74
            :...:.||..::.:|..||..|.....|..:.:    :|..|...:..:|.:.:.|.....|...
plant    27 FACAILASMTSIILGYDIGVMSGASIFIKDDLK----LSDVQLEILMGILNIYSLVGSGAAGRTS 87

  Fly    75 DWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATALRGT 139
            ||:|||.|::.....:..|.:||.||.|...:..|||:.|:..|...:.||:|..|:...:.||.
plant    88 DWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGF 152

  Fly   140 IGSFFQLLIVSGVLYGYLVGAFLPLLTINI-------LCAILPVIFAIIHFFMPESPVYLAMKGR 197
            :.||.::.|..|:|.||:...|...|..::       :.|:..|..||....|||||.:|.::||
plant   153 LTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGVLAMPESPRWLVLQGR 217

  Fly   198 NDDAAKALQWLRGKDADIDDELKEILEESQKQIDMP-----QVNILSS------------LRRP- 244
            ..||.|.|.    |.::..:|....|::.::.:.:|     .|.::.:            |.|| 
plant   218 LGDAFKVLD----KTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPT 278

  Fly   245 -----IVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSD---ATLIIGVTQVTSTL 301
                 |::..|||    ...||.:||:||:.||.:||...|.. |.:|   ||:.:||.:....:
plant   279 PSVRHILIACLGI----HFAQQASGIDAVVLYSPTIFSKAGLK-SKNDQLLATVAVGVVKTLFIV 338

  Fly   302 VAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKENDPASMDNFGW---LPISSICIFIIFFS 363
            |...::|:.|||.|||.|...|.:|...:|....:...:|.  ....|   |.::::..|:..||
plant   339 VGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPG--QTLKWAIGLAVTTVMTFVATFS 401

  Fly   364 IGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIA 428
            ||.|||.|:..:|:|...:::...|:....|.|.:.::.:.|..|...:..|..|.:|..:|..|
plant   402 IGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAA 466

  Fly   429 FFYSLFFVPETKGKTIIEIQDL 450
            :.:...|:|||:|..:.|::.|
plant   467 WVFFFTFLPETRGIPLEEMETL 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 132/473 (28%)
MFS 14..436 CDD:119392 125/457 (27%)
PMT1NP_179209.1 Sugar_tr 29..489 CDD:278511 132/475 (28%)
MFS 31..473 CDD:119392 125/456 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.900

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