DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6484 and PMT1

DIOPT Version :10

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_179209.1 Gene:PMT1 / 816109 AraportID:AT2G16120 Length:511 Species:Arabidopsis thaliana


Alignment Length:477 Identity:132/477 - (27%)
Similarity:224/477 - (46%) Gaps:51/477 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIAGLSASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFGWVSSLLTLGATVICIPIGFAI 74
            :...:.||..::.:|..||..|.....|..:.:    :|..|...:..:|.:.:.|.....|...
plant    27 FACAILASMTSIILGYDIGVMSGASIFIKDDLK----LSDVQLEILMGILNIYSLVGSGAAGRTS 87

  Fly    75 DWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATALRGT 139
            ||:|||.|::.....:..|.:||.||.|...:..|||:.|:..|...:.||:|..|:...:.||.
plant    88 DWLGRRYTIVLAGAFFFCGALLMGFATNYPFIMVGRFVAGIGVGYAMMIAPVYTAEVAPASSRGF 152

  Fly   140 IGSFFQLLIVSGVLYGYLVGAFLPLLTINI-------LCAILPVIFAIIHFFMPESPVYLAMKGR 197
            :.||.::.|..|:|.||:...|...|..::       :.|:..|..||....|||||.:|.::||
plant   153 LTSFPEIFINIGILLGYVSNYFFSKLPEHLGWRFMLGVGAVPSVFLAIGVLAMPESPRWLVLQGR 217

  Fly   198 NDDAAKALQWLRGKDADIDDELKEILEESQKQIDMP-----QVNILSS------------LRRP- 244
            ..||.|.|.    |.::..:|....|::.::.:.:|     .|.::.:            |.|| 
plant   218 LGDAFKVLD----KTSNTKEEAISRLDDIKRAVGIPDDMTDDVIVVPNKKSAGKGVWKDLLVRPT 278

  Fly   245 -----IVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSD---ATLIIGVTQVTSTL 301
                 |::..|||    ...||.:||:||:.||.:||...|.. |.:|   ||:.:||.:....:
plant   279 PSVRHILIACLGI----HFAQQASGIDAVVLYSPTIFSKAGLK-SKNDQLLATVAVGVVKTLFIV 338

  Fly   302 VAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKENDPASMDNFGW---LPISSICIFIIFFS 363
            |...::|:.|||.|||.|...|.:|...:|....:...:|.  ....|   |.::::..|:..||
plant   339 VGTCVVDRFGRRALLLTSMGGMFLSLTALGTSLTVINRNPG--QTLKWAIGLAVTTVMTFVATFS 401

  Fly   364 IGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIA 428
            ||.|||.|:..:|:|...:::...|:....|.|.:.::.:.|..|...:..|..|.:|..:|..|
plant   402 IGAGPVTWVYCSEIFPVRLRAQGASLGVMLNRLMSGIIGMTFLSLSKGLTIGGAFLLFAGVAAAA 466

  Fly   429 FFYSLFFVPETKGKTIIEIQDL 450
            :.:...|:|||:|..:.|::.|
plant   467 WVFFFTFLPETRGIPLEEMETL 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 MFS_GLUT6_8_Class3_like 10..446 CDD:340916 130/471 (28%)
PMT1NP_179209.1 MFS_PLT 32..485 CDD:340995 130/467 (28%)

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