DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and F53H8.3

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_001359933.1 Gene:F53H8.3 / 186195 WormBaseID:WBGene00018779 Length:509 Species:Caenorhabditis elegans


Alignment Length:485 Identity:124/485 - (25%)
Similarity:207/485 - (42%) Gaps:87/485 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IAGLSASFGALCMGASIGWSSPVENMIT--VNTEY--------GFPISSSQFGWVSSLLTLGATV 65
            :.|.||.|      .|.|..:|.:.:||  :|..|        ...:|:..:.:|.|.:.:||. 
 Worm    14 VLGGSAQF------YSYGVVNPAQVVITDWINQTYIDRYKAPLSLTVSNVIWSFVVSSIAIGAI- 71

  Fly    66 ICIPIGFAIDWI-----GRRPTMLALIPPYMVGWVLMLFA----------KNVTMLYFGRFILGM 115
                :|.:...|     |||..|       ....:|.:||          .:..:|.||||:.|:
 Worm    72 ----LGASFTRIIGEKYGRRNGM-------FFNGILNVFAALFELVAKRFSSPELLIFGRFVYGI 125

  Fly   116 CGGAFCVTAPMYCTEITATALRGTIGSFFQLLIVSGVLYGYLVG-------------AF-LPLLT 166
            ..|......|||..|||....||..|:..|:.:.....:..|:|             || ||.|.
 Worm   126 NMGLSSGLVPMYLMEITPYKYRGPAGTLHQIAVAFSDWFSLLIGLPEVLGDQNNWPLAFALPGLP 190

  Fly   167 INILCAILPVIFAIIHFFMPESPVY-LAMKGRNDDAAKALQWLRGKDADIDDELKEILEESQKQI 230
            ...|..|||        |.||||.| |..|...|.|.|.::.|.||     ::...:.|...:::
 Worm   191 ALALVCILP--------FCPESPKYTLGTKHDRDKALKDVELLIGK-----EQAPHMFESIVREV 242

  Fly   231 --DMPQVNILSSLRRPIVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTG-SDISGSDATLII 292
              |...........||.:...|.:::::.:.||:||..||..:|..:|.:.| :.:....:||.|
 Worm   243 ALDEGDGTFRELFTRPDLRIPLAVSIIVMIAQQFTGCTAVFAFSTDMFLNAGLTPVIARFSTLAI 307

  Fly   293 GVTQVTSTLVAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKENDPASMDNFGWL---PISS 354
            |:........:..:|.|.|||.|.|.......|:..|:.::..|:     :.:|..|.   .|.|
 Worm   308 GIVYFLFACTSPFLIHKVGRRWLSLFQLASCMVALMLLSLFTFLQ-----NYENIEWARYGTIFS 367

  Fly   355 ICIFIIFFSIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFW 419
            :..::..:.:| .|:||::.:|||::..::.|.:::....|..||:|:..:...:..:  |.||.
 Worm   368 LVFYMCVYGVG-SPIPWIIASELFTQQFRATAVTVSVFVAWTFAFIVSTSYLPFQQLV--GITFS 429

  Fly   420 IFTAIAVIAFFYSLFFV--PETKGKTIIEI 447
            .|..|..:|.|....:|  |||:.:.::||
 Worm   430 YFPFIIGLAVFGIFIYVLLPETRDRPMVEI 459

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 123/482 (26%)
MFS 14..436 CDD:119392 117/467 (25%)
F53H8.3NP_001359933.1 MFS_GLUT_Class1_2_like 9..454 CDD:340915 122/478 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.