DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6484 and hmit-1.2

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_507624.1 Gene:hmit-1.2 / 180206 WormBaseID:WBGene00013074 Length:613 Species:Caenorhabditis elegans


Alignment Length:571 Identity:139/571 - (24%)
Similarity:231/571 - (40%) Gaps:153/571 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIAGLSASFGALCMGASIGWSSPVEN--MITVNTEYGF-PISSSQFGWVSSLLTLGATVICIPIG 71
            |:.|.:|..|    |...|:.:.|.:  |:.|....|. |:.:.   |...::::...:..:...
 Worm    27 YLLGSAAIIG----GFLFGYDTSVVSAAMLYVPEAPGLKPMGTV---WKEVIVSITPGMAAVGAW 84

  Fly    72 FA---IDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITA 133
            |:   .|..||:|.::.....::.|.|:...|....::..||..||:..|...:..|:|..|.:.
 Worm    85 FSGAGSDRYGRKPIIIGSTLIFVCGAVICAVAWTKIVMLIGRIFLGVGIGFASMVVPVYLGEASP 149

  Fly   134 TALRGTIGSFFQLLI-----VSGVLYG-------YLVG-------AFLPLLTINILCAILPVIFA 179
            |.:|||:.|.|.::|     |:.::.|       |.:|       |.:|.| |..:|.|      
 Worm   150 THVRGTLVSAFAMMISFGQVVANIMGGVFSYWEPYTIGWRLMFAFAGIPAL-IQFVCFI------ 207

  Fly   180 IIHFFMPESPVYLAMKGRNDDAAKALQWLRGKDAD-IDDELKEI---LEESQKQIDMPQVN---I 237
                |:||:|.:|...|..:.|.:.|:.:.|.:.: |:.||.||   .||.|||::..:.:   |
 Worm   208 ----FLPETPRWLYENGHTEQAEQVLEKIYGGNTEWIEYELAEIKTYAEERQKQMEEEKKSGPVI 268

  Fly   238 LSSLRRPIVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSD-------ISGSDATLIIGVT 295
            ...|:.|.|||...|..:||.|||..|||.:|:|:|.|....|.:       ||     :|:.:.
 Worm   269 WRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSAGIENYHTIIWIS-----VILSIC 328

  Fly   296 QVTSTLVAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKENDPA------------------ 342
            .:......:..|:|.|||.|.|.|...:.||..|:||.|.|..||.|                  
 Worm   329 NLIGPFAPMFFIEKLGRRKLFLFSCAGVVVSLVLIGVSFLLVGNDSAPNFDRSAYLLAGNYQSNG 393

  Fly   343 --------------------------------------------------------------SMD 345
                                                                          :..
 Worm   394 EAESCLMLSNCDSCVTSEHCGFCEDSETRTGFCLPVDHNDVTLYSSTGLCTNGLDKSNSSFPNAT 458

  Fly   346 NFGW-----------LPISSICIFIIFFSIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAF 399
            ::.|           |||..:.::::.||.||..:||::.:|.:....:|...||:..|||:...
 Worm   459 SYVWQKHHCTTSYTILPIVMMGVYLLTFSCGFTSLPWVLNSEFYPMWARSTCVSISTLSNWVFNL 523

  Fly   400 VVTLLFPILKSSIGPGPTFWIFTAIAVIAFFYSLFFVPETKGKTIIEIQDL 450
            ::.|.:..|..:|.....||::....:|||.:..|.||||.|.:|.|::.|
 Worm   524 IIALTYLSLTHAITKYGAFWLYAIFTIIAFIFIYFLVPETTGYSIDEVEML 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 137/567 (24%)
MFS 14..436 CDD:119392 129/551 (23%)
hmit-1.2NP_507624.1 MFS 32..562 CDD:421695 130/552 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157920
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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