DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6484 and hmit-1.1

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_507623.1 Gene:hmit-1.1 / 180205 WormBaseID:WBGene00013073 Length:606 Species:Caenorhabditis elegans


Alignment Length:508 Identity:133/508 - (26%)
Similarity:219/508 - (43%) Gaps:108/508 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 WVSSLLTLG---ATVICIPIGFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGM 115
            |...|:::.   |.|..:..|.:.|:||||..:|.....:.:|.::...:.|..||..||.:||:
 Worm    66 WQEVLVSISPGMAAVGSLMSGTSSDYIGRRKVILGASAIFTIGALVCAASVNKIMLLVGRVLLGI 130

  Fly   116 CGGAFCVTAPMYCTEITATALRGTIGSFFQLLIVSG-VLYGYLVGAFLPLLTINI-------LCA 172
            ..|...:..|:|..|...|.:||.:.:.|.|:|..| |:.....|||..:...|:       ..|
 Worm   131 AIGFASMIVPVYLGETAPTHVRGMLVAAFALMISFGQVVANITGGAFSYIDPYNVGWRLMFAFAA 195

  Fly   173 ILPVIFAIIHFFMPESPVYLAMKGRNDDAAKALQWLRGKDAD-IDDELKEIL---EESQKQIDMP 233
            :..:|..:...|:||:|.:|...|...:..:.|:.:...|.: ::.|:.||:   |:..|:.:..
 Worm   196 VPSIIQFVCFMFLPETPRWLYENGFETETREVLEKVYNGDKEWVEYEMAEIIAFNEDQAKENEKA 260

  Fly   234 QVN---ILSSLRRPIVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSDATL----I 291
            ..:   |...|:.|.|||...|..:||.|||..|||.:|:|:|.|...:|  ||.:..|:    :
 Worm   261 HASGPVIWRILKTPHVLKACFIGSMLQAFQQLAGINTILYYTADIIRSSG--ISNNHTTIWISVL 323

  Fly   292 IGVTQVTSTLVAVAIIDKAGRRILLLISGVLMAVSTALMGVYFQLKEND---------------- 340
            :.:.......|.:::|:|.||||:.|.|..|:.:|...:||.|.|..:|                
 Worm   324 LSLCNFIGPFVPMSLIEKVGRRIIFLFSCGLVVLSLVFIGVAFLLVNHDSAATLPANQYGSNFNS 388

  Fly   341 -------------------------------------PASMD--------------------NFG 348
                                                 ||..|                    ||.
 Worm   389 SYPDAKGCMAYSNCDYCVTTDACGFCHDANTKQGYCLPAGFDNPEVYSSTGSCTNSNGSIANNFK 453

  Fly   349 W-----------LPISSICIFIIFFSIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVT 402
            |           |||.:..::::.||.||..:||::.:|.:....:|...:|:.||||:...::.
 Worm   454 WEKYYCDTKYTLLPIIACGVYLLTFSSGFTSLPWVLNSEFYPMWARSTCVAISTTSNWVFNLIIA 518

  Fly   403 LLFPILKSSIGPGPTFWIFTAIAVIAFFYSLFFVPETKGKTIIEIQDLLSGGK 455
            |.:..|...||....||::..:.||||.:.||.||||||.:|.|::.|....|
 Worm   519 LTYLSLTQVIGKYGAFWLYAGLTVIAFIFILFLVPETKGYSIEEVEMLFMNKK 571

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 131/502 (26%)
MFS 14..436 CDD:119392 123/487 (25%)
hmit-1.1NP_507623.1 MFS_HMIT_like 31..554 CDD:340918 124/489 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D430696at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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