DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and C35A11.4

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_504430.2 Gene:C35A11.4 / 178921 WormBaseID:WBGene00016431 Length:515 Species:Caenorhabditis elegans


Alignment Length:474 Identity:121/474 - (25%)
Similarity:218/474 - (45%) Gaps:48/474 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 IAGLSASFGALCMGASIGWSSP--------VENMITVNTEYGFPISSSQFGW--VSSLLTLGATV 65
            :|.:::..|:...|.::..::|        :...:....:.|...::.|..|  |.::|.|||..
 Worm    12 VAVITSIAGSFHFGFNLVLTNPSQEAFLNFMNQTLAKRFDGGLSDNTLQNIWSFVVAILFLGALA 76

  Fly    66 ICIPIGFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTM--LYF-GRFILGMCGGAFCVTAPMY 127
            ....|....|||||:..:...|...::...:.:.:|.:.:  ||. .|.::|.........:.::
 Worm    77 GSFSIRLIADWIGRKNGLYISIAVGVLAGGMSIASKFIPLFELYIASRIVMGWSVSVSLGLSALF 141

  Fly   128 CTEITATALRGTIGSFFQLLIVSGVLYGYLVGAFLPLL--TINILCAILPVIFAIIHF------F 184
            .:|.:....||.||......:..|.:.|.::.  :|.:  |.::...|......|:.|      |
 Worm   142 LSEASPKQNRGAIGMMTGTCVQLGTVCGSVIA--MPQIFGTEDLWWLIYATEIGIMLFFGAALPF 204

  Fly   185 MPESPVYLAMKGRNDDAAKALQWLRGKDADIDD------ELKEILEESQKQIDMPQVNILSSLRR 243
            .||||.:|..:|..:.|.|::.:.  .:.:||:      |:||..:.|.|...|..:....|||.
 Worm   205 FPESPGFLIQRGATEAATKSIAYY--YNCEIDEAEKHLNEIKEEQKNSTKNFKMMDIVRKKSLRD 267

  Fly   244 PIVLKGLGIAVLLQVFQQWTGINAVLFYSASIFEDTGSDI-SGSDATLIIGVTQVTSTLVAVAII 307
            ...     |.|::.....::|:..:..::..|.:|||..: ..|.|...|.|..:.|::||..|:
 Worm   268 KAF-----IGVVVTFAMSFSGVAVINAFAFDILKDTGLKVLEASLANDAISVVSMISSIVAAVIV 327

  Fly   308 DKAGRRILLLIS--GVLMA--VSTALMGVYFQLKENDPASMDNFGWLPISSICIFIIFFSIGFGP 368
            |:.|||.|||||  |:|:.  :..|||..:::.:.:      ..|::.|..||||..||::|.||
 Worm   328 DRNGRRPLLLISFAGILVCNLIIFALMFTFYKFENH------VLGFILICFICIFTFFFALGPGP 386

  Fly   369 VPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWI-FTAIAVIAFFYS 432
            :.:.:.|||..:..:|.|.|.|.....||.||:...|..:|:.:|...::.| |.|....:..|.
 Worm   387 LCYFINAELVGQAARSAAQSWASVIQMLSRFVIVTAFLPMKNQLGEAWSYLILFVAPVAASLVYL 451

  Fly   433 LFFVPETKGKTIIEIQDLL 451
            .|.:||||.|...|:::.:
 Worm   452 YFSLPETKNKNPFEVEEAI 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 120/469 (26%)
MFS 14..436 CDD:119392 114/454 (25%)
C35A11.4NP_504430.2 MFS_GLUT_Class1_2_like 13..461 CDD:340915 119/462 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157909
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X26
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.