DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:547 Identity:132/547 - (24%)
Similarity:231/547 - (42%) Gaps:111/547 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIAGLSASFGALCMGASIGWSSPVENMITVNTEYGF-PISSSQFGWVSSLLTLGATVICIP---I 70
            |:...||..|....|...|..|..  |:.|....|. |:.|.   |...::::...|..|.   .
 Worm    29 YMLAFSAVIGGFLFGYDTGIVSAA--MLYVPNASGIKPLDSV---WQEIIVSITPGVAAIGSLCS 88

  Fly    71 GFAIDWIGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATA 135
            |...|::||:..::.....:.:|.::...|....:|..||.:||:..|...:..|:|.:|.:.:.
 Worm    89 GPGSDFLGRKKIIIGASVTFTIGAIICAAAWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSH 153

  Fly   136 LRGTIGSFFQLLIVSGVLYGYLVGAFLPLL-------TINILCAILPVIFAIIHF-FMPESPVYL 192
            :||.:.:.|||:|..|::...::|.....:       .:....|.:|.|...:.| |:||||.:|
 Worm   154 IRGKLVTGFQLMITVGLVIANIIGGAFSYVDPDQVGWRLMFAFAAVPAIIQFVCFLFLPESPRWL 218

  Fly   193 AMKGRNDDAAKALQWL-RGKDADIDDELKEILEESQKQIDMPQVN------ILSSLRRPIVLKGL 250
            ...||..:|.:.|..: .|....:|.|:.||....::::.....:      |:..|:.|.|.|.:
 Worm   219 YEHGRTVEAREVLTRIYNGHTEWVDYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAM 283

  Fly   251 GIAVLLQVFQQWTGINAVLFYSASIFEDTGSDISGSDATLIIGVTQVT--STLVAVAIIDKAGRR 313
            .|..|||:|||.:|||.|::|:.:|....|...:.:...:.:|.:.:.  .|.:.:|::::.|||
 Worm   284 IIGSLLQMFQQLSGINTVMYYTGNIIRSAGVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRR 348

  Fly   314 ILLLISGVLMAVSTALMGVYFQLKEND-------------------------------------- 340
            :|||:|.:.:.:....|||.|.|..||                                      
 Worm   349 VLLLVSMIGVILFLIAMGVSFLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDEN 413

  Fly   341 ---------------PASMD---------------------NFGW-----------LPISSICIF 358
                           |...|                     :|.|           |||..:..:
 Worm   414 CGFCESKVAKKGYCLPFPSDDSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVFY 478

  Fly   359 IIFFSIGFGPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTA 423
            ::.||.|:.|:||::.||.:....:|.|.|::...||:...:|:|.|..|..:.....||:|:..
 Worm   479 LLSFSAGYAPLPWVLNAEFYPLWARSTAVSVSTACNWIFNLIVSLTFLSLSQAATKYGTFFIYCG 543

  Fly   424 IAVIAFFYSLFFVPETKGKTIIEIQDL 450
            ..::|..:..||||||||.:|.|::.|
 Worm   544 CTMVALVFVFFFVPETKGYSIDEVEML 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 131/543 (24%)
MFS 14..436 CDD:119392 121/527 (23%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 123/528 (23%)
MFS <190..>249 CDD:421695 17/58 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157921
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.740

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