DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG6484 and Slc2a13

DIOPT Version :9

Sequence 1:NP_611234.1 Gene:CG6484 / 36994 FlyBaseID:FBgn0034247 Length:465 Species:Drosophila melanogaster
Sequence 2:NP_598295.2 Gene:Slc2a13 / 171147 RGDID:621814 Length:637 Species:Rattus norvegicus


Alignment Length:539 Identity:127/539 - (23%)
Similarity:219/539 - (40%) Gaps:110/539 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 YIAGLSASFGALCMGASIGWSSPVENMITVNTEYGFPISSSQFGWVSSLLT--LGATVICIPIGF 72
            |.|...::.|....|...|..|....::......|..       |...|::  :||..:....|.
  Rat    71 YAAAAFSALGGFLFGYDTGVVSGAMLLLRRQMRLGAM-------WQELLVSGAVGAAAVAALAGG 128

  Fly    73 AIDW-IGRRPTMLALIPPYMVGWVLMLFAKNVTMLYFGRFILGMCGGAFCVTAPMYCTEITATAL 136
            |::. :|||..:|.......||..::..|.|...|..||.::|:..|...:|.|:|..|::...|
  Rat   129 ALNGALGRRSAILLASALCTVGSAVLAAAANKETLLAGRLVVGLGIGIASMTVPVYIAEVSPPNL 193

  Fly   137 RGTIGSFFQLLIVSGVLYGYLV-GAFLPL----LTINILCAILPVIFAIIHF-FMPESPVYLAMK 195
            ||.:.:...|.|..|..:..:| |||..|    ....:..|.:|.:...:.| |:||||.:|..|
  Rat   194 RGRLVTINTLFITGGQFFASVVDGAFSYLQKDGWRYMLGLAAIPAVIQFLGFLFLPESPRWLIQK 258

  Fly   196 GRNDDAAKALQWLRGKDADIDDE---LKEILEESQKQIDMPQVNILSSLRRPIVLKGLGIAVLLQ 257
            |:...|.:.|..:||... ||:|   ::..:||.:|:.......|...|..|...:.|.:...||
  Rat   259 GQTQKARRILSQMRGNQT-IDEEYDSIRNSIEEEEKEASAAGPIICRMLSYPPTRRALAVGCGLQ 322

  Fly   258 VFQQWTGINAVLFYSASIFEDTGSDISGSDATLIIGVTQVTS------TLVAVAIIDKAGRRILL 316
            :|||.:|||.:::|||:|.:.:|.:    |..|.|.:..:|:      |||.|.:::|.|||.|.
  Rat   323 MFQQLSGINTIMYYSATILQMSGVE----DDRLAIWLASITAFTNFIFTLVGVWLVEKVGRRKLT 383

  Fly   317 L--ISGVLMAVSTALMGVY---------------------------------------FQLKEND 340
            .  ::|..:|::...:|..                                       |..|.|.
  Rat   384 FGSLAGTTVALTILALGFLLSAQVSPRVTFRPTAPSGQNATCTEYSYCNECMLDPDCGFCYKINS 448

  Fly   341 PASMDN---------------------------------------FGWLPISSICIFIIFFSIGF 366
            .|.:|:                                       :.|..:..:.::::||:.|.
  Rat   449 SAVIDSSCVPVNKASTNEAAWGRCENETKFKAEDVHWAYSFCPTPYSWTALVGLVLYLVFFAPGM 513

  Fly   367 GPVPWLVMAELFSEDVKSVAGSIAGTSNWLSAFVVTLLFPILKSSIGPGPTFWIFTAIAVIAFFY 431
            ||:||.|.:|::....:|...:.:...||:...:|:|.|......:.....|:::...|.:...:
  Rat   514 GPMPWTVNSEIYPLWARSTGNACSAGINWIFNVLVSLTFLHTAEYLTYYGAFFLYAGFAAVGLLF 578

  Fly   432 SLFFVPETKGKTIIEIQDL 450
            ....:||||||.:.||:.|
  Rat   579 VYGCLPETKGKKLEEIESL 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6484NP_611234.1 Sugar_tr 14..451 CDD:278511 125/535 (23%)
MFS 14..436 CDD:119392 116/519 (22%)
Slc2a13NP_598295.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 16..38
MFS 75..580 CDD:119392 116/516 (22%)
Sugar_tr 78..598 CDD:278511 125/532 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166337689
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0254
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D524131at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

Return to query results.
Submit another query.