| Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_199328.1 | Gene: | RTL3 / 834551 | AraportID: | AT5G45150 | Length: | 957 | Species: | Arabidopsis thaliana |
| Alignment Length: | 209 | Identity: | 60/209 - (28%) |
|---|---|---|---|
| Similarity: | 89/209 - (42%) | Gaps: | 58/209 - (27%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1436 LEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALT 1500
Fly 1501 DLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQP 1565
Fly 1566 TPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEALIAAVYLDCR-D 1629
Fly 1630 LQRTWEVIFNLFEP 1643 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-2 | NP_523778.2 | DEXHc_dicer | 6..204 | CDD:350792 | |
| Dicer_PBD | 241..343 | CDD:277191 | |||
| SF2_C_dicer | 360..506 | CDD:350189 | |||
| Dicer_dimer | 571..670 | CDD:460900 | |||
| PAZ | 843..1004 | CDD:198017 | |||
| RIBOc | 1194..1391 | CDD:238333 | |||
| RIBOc | 1448..1649 | CDD:238333 | 55/197 (28%) | ||
| dsrm | 1653..1717 | CDD:425434 | |||
| RTL3 | NP_199328.1 | RIBOc | 19..165 | CDD:238333 | 55/197 (28%) |
| DSRM_SF | 308..381 | CDD:444671 | |||
| RIBOc | 430..574 | CDD:238333 | |||
| dsrm | 584..643 | CDD:425434 | |||
| DSRM_SF | 837..911 | CDD:444671 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||