Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001189798.1 | Gene: | DCL2 / 821300 | AraportID: | AT3G03300 | Length: | 1388 | Species: | Arabidopsis thaliana |
Alignment Length: | 1805 | Identity: | 403/1805 - (22%) |
---|---|---|---|
Similarity: | 670/1805 - (37%) | Gaps: | 525/1805 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 EDVEIKP----RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALF 62
Fly 63 MCNTVELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTY 127
Fly 128 VALSSLSVVIIDECHHGTGHHPF----REFMRLFTIANQTKLPRVVGLTGVLI--KGNEITNVAT 186
Fly 187 KLKELEITYRGNIITVSDTKEMENVMLYATKPTEVM--VSFPHQEQVLTVTRLISAEIEKFYVSL 249
Fly 250 DLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVEFDIKRRQA 314
Fly 315 ETLSVKLMHRTALTLCEKI-----RHLLVQKLQDMTYDDDDDNVNTEEVIMNFSTPKVQRFLMSL 374
Fly 375 KVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLE 439
Fly 440 ---RKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTTEAK 501
Fly 502 FVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTEPELYEIKGHFQDDID-PF--TNENG 563
Fly 564 AVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRD 628
Fly 629 TIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGDSVTA- 692
Fly 693 TVNKADKSKDRTYKTECPLEFYDALPRVGEICYAYEIFLEPQFES-CEYTEHMYL---NLQTPRN 753
Fly 754 Y---AILLRNKLP----------RLAE-----MPLFSNQGKLHV---------RVANAPLEVIIQ 791
Fly 792 NSEQLELLHQFHGMVFRDILKIWHPFFVLDRRSKENSYLVVPLILGAGEQKCFDWELMTNF---- 852
Fly 853 RRLPQSHGSNVQQREQQPAPRPED-------FEGKIVTQWYANYDKPMLVTK-VHRELTPLSYME 909
Fly 910 K-NQQDKTYYEFTMSKYGNRIGDVVHKDKFMIEVRDLTEQLTFYVHNRGKFNAKSKAKMKVILIP 973
Fly 974 ELCFNFNFP--GDLWLKLIFLPSILNRMYFLLHAEALRKRFNTYLNLHLLPFNGTDYMPRPLEID 1036
Fly 1037 YSLKRNVDPLGNVIPTEDIEEPKSLLEPMPTKSIEASVANLEITEFENPWQKYMEPVDLSRNLLS 1101
Fly 1102 TYPVELDYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYGNRTPAKTNANVPALMPSKPT 1166
Fly 1167 VRGKVKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASK 1231
Fly 1232 YSDWNEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQ---FTPRYTWLPPG-----ISLPHNV 1288
Fly 1289 LALWRENPEFAKIIGPHNLRDLALGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVN 1353
Fly 1354 FCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMR 1418
Fly 1419 ANVNTTEID-------GFLINHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIGD 1476
Fly 1477 AILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVN 1541
Fly 1542 FQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNV 1606
Fly 1607 DVPKALGDVLEALIAAVYLDCRDLQRTWEVIFNLFEPEL--QEFTRKVPINHIRQLVE--HKHAK 1667
Fly 1668 PVFSSPIVEGETVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQL 1717 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-2 | NP_523778.2 | MPH1 | 6..542 | CDD:224036 | 146/555 (26%) |
DEXDc | 22..173 | CDD:238005 | 60/154 (39%) | ||
Dicer_PBD | 241..343 | CDD:277191 | 17/106 (16%) | ||
HELICc | <438..495 | CDD:197757 | 24/59 (41%) | ||
Dicer_dimer | 572..665 | CDD:281376 | 19/92 (21%) | ||
PAZ | 843..1004 | CDD:198017 | 41/175 (23%) | ||
RIBOc | 1194..1391 | CDD:238333 | 47/204 (23%) | ||
Rnc | 1433..1719 | CDD:223644 | 83/289 (29%) | ||
RIBOc | 1448..1649 | CDD:238333 | 59/202 (29%) | ||
dsrm | 1653..1717 | CDD:278464 | 16/65 (25%) | ||
DCL2 | NP_001189798.1 | DEXDc | 38..192 | CDD:238005 | 61/156 (39%) |
Helicase_C | 382..489 | CDD:278689 | 38/117 (32%) | ||
Dicer_dimer | 560..637 | CDD:281376 | 19/92 (21%) | ||
PAZ_CAF_like | 807..937 | CDD:239210 | 31/137 (23%) | ||
RIBOc | 980..1123 | CDD:238333 | 47/204 (23%) | ||
Rnc | 1151..1384 | CDD:223644 | 83/287 (29%) | ||
RIBOc | 1164..1318 | CDD:238333 | 59/204 (29%) | ||
DSRM | 1323..1383 | CDD:214634 | 17/64 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 113 | 1.000 | Domainoid score | I2031 |
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H135164 | |
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG57860 | |
OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002051 | |
OrthoInspector | 1 | 1.000 | - | - | mtm1149 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101152 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1728 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.690 |