DRSC/TRiP Functional Genomics Resources

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Protein Alignment Dcr-2 and Mrpl44

DIOPT Version :10

Sequence 1:NP_523778.2 Gene:Dcr-2 / 36993 FlyBaseID:FBgn0034246 Length:1722 Species:Drosophila melanogaster
Sequence 2:NP_001074679.1 Gene:Mrpl44 / 69163 MGIID:1916413 Length:333 Species:Mus musculus


Alignment Length:273 Identity:54/273 - (19%)
Similarity:99/273 - (36%) Gaps:87/273 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly  1522 HFFILAENAKLSEIIS------KFVNFQESQGHRVTNYVRILLEEA-------DVQPTPLDLDDE 1573
            |..:.|..::|.|..|      .|:|         :.|::  .|||       :.:...|:|.|.
Mouse    69 HAEVQAFGSRLQETFSLDLLKTAFIN---------SCYIK--SEEAKRQSLGIEKEAALLNLKDN 122

  Fly  1574 LDMTE--LPHANKCISQEAE---KGVPPKG------------------------EFNMSTNVDVP 1609
            .::.|  |..:::|::|..|   ..:|.:|                        :..:|....||
Mouse   123 QELFEQGLSFSHRCLTQFLEDEFPDLPAEGTESLVSFLTGEAVVCHVARNLAVEQLTLSAEFPVP 187

  Fly  1610 -----KALGDVLEALI-------AAVY--------LDCRDLQRTWEVI--FNLFEPELQEFTRKV 1652
                 :....|:.||:       ||::        :..::|...|.|:  ..|...||::.....
Mouse   188 LPVLRQTFFAVIGALLQSSGPERAALFIRDFLITQMTGKELFEMWTVVNPMGLLVEELKKRNISA 252

  Fly  1653 PINHIRQLVEHKHAKPVF-------SSPIVE--GETVMVSCQFTCMEKTIKVYGFGSNK---DQA 1705
            |.:.:.:......|.|::       ...|.|  ||||:|:.:........|:|||..|:   |.:
Mouse   253 PESRLTRQSGSTTALPLYFVGLYCDRKLIAEGPGETVLVAEEEAARVALRKLYGFTENRRPWDYS 317

  Fly  1706 KLSAAKHALQQLS 1718
            |...:....:|.|
Mouse   318 KPKESPKRAEQTS 330

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Dcr-2NP_523778.2 DEXHc_dicer 6..204 CDD:350792
Dicer_PBD 241..343 CDD:277191
SF2_C_dicer 360..506 CDD:350189
Dicer_dimer 571..670 CDD:460900
PAZ 843..1004 CDD:198017
RIBOc 1194..1391 CDD:238333
RIBOc 1448..1649 CDD:238333 35/190 (18%)
dsrm 1653..1717 CDD:425434 17/75 (23%)
Mrpl44NP_001074679.1 DSRM_MRPL44 225..307 CDD:380703 18/81 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 311..333 4/20 (20%)
Blue background indicates that the domain is not in the aligned region.

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