Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001103942.1 | Gene: | drosha / 567505 | ZFINID: | ZDB-GENE-070209-23 | Length: | 1289 | Species: | Danio rerio |
Alignment Length: | 1301 | Identity: | 245/1301 - (18%) |
---|---|---|---|
Similarity: | 402/1301 - (30%) | Gaps: | 512/1301 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 597 LQEDERDRIFGVSAKGKHVIS-----------------------INMP--VNCMLRDTIYS-DPM 635
Fly 636 DNVKTAKISAAFKACKVLY-----SLGELNERF--------VPKT-------------------- 667
Fly 668 ------------------LKERVASIADVHFEHW-NKYGDSVTATVNKADKSKDRT------YKT 707
Fly 708 ECPLEFYDALPRVGEICYAYEI-------FLEPQFESCEYTEHMYL------NLQTPRNYAILLR 759
Fly 760 NKLPRLAEMPL-----FSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILKI--WHPF 817
Fly 818 FVLDRRSKENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIV 882
Fly 883 TQWYANYDKPMLVTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDVVHKDKFMIEVRDLTE 947
Fly 948 QLTFYVHNRGKFNAKSKAKMKVILIPELCF------NFNFPGD-----LWLKLIFLPSIL----- 996
Fly 997 ----NRMYFLLHAEALRK--RFNTYLNLHLLPFNGTDYMPRPLEIDYS--------LKRNVDPLG 1047
Fly 1048 NVIP--TEDIEEPKSLLEPMPTKSI-----EASVANLEITEFENPWQKYMEPVDLSRNLLSTYPV 1105
Fly 1106 ELDYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYGNRTPAKTNANVPALMPSKPTVRGK 1170
Fly 1171 VKPLLILQKTVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDW 1235
Fly 1236 NEGTLTEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAK 1300
Fly 1301 IIGPHNLRDLALGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKV 1365
Fly 1366 IADTLEALLGVIVKNYGLQHAFKMLEYFKICRAD--------------IDKPLTQLLNLELGGKK 1416
Fly 1417 MRANVNTTEIDGFLINHYYLEKNLGYTFKDRRYLLQALTHPSYPTNRIT-GSYQELEFIGDAILD 1480
Fly 1481 FLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQES 1545
Fly 1546 QGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPK 1610
Fly 1611 ALGDVLEALIAAVYLDCRDLQRTWEVIFNLFEPELQEFTRK------------------------ 1651
Fly 1652 -VPINHIRQLVEHKHAKPVFSSPIVEGETVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQ 1715
Fly 1716 Q 1716 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-2 | NP_523778.2 | MPH1 | 6..542 | CDD:224036 | |
DEXDc | 22..173 | CDD:238005 | |||
Dicer_PBD | 241..343 | CDD:277191 | |||
HELICc | <438..495 | CDD:197757 | |||
Dicer_dimer | 572..665 | CDD:281376 | 21/106 (20%) | ||
PAZ | 843..1004 | CDD:198017 | 30/180 (17%) | ||
RIBOc | 1194..1391 | CDD:238333 | 31/196 (16%) | ||
Rnc | 1433..1719 | CDD:223644 | 72/310 (23%) | ||
RIBOc | 1448..1649 | CDD:238333 | 52/201 (26%) | ||
dsrm | 1653..1717 | CDD:278464 | 16/64 (25%) | ||
drosha | NP_001103942.1 | WWbp | <14..63 | CDD:304964 | |
DUF1777 | 204..>320 | CDD:285811 | 5/37 (14%) | ||
PRP38_assoc | 206..308 | CDD:289628 | 5/25 (20%) | ||
RIBOc | 877..989 | CDD:238333 | 32/221 (14%) | ||
rnc | 1025..1253 | CDD:234633 | 74/315 (23%) | ||
RIBOc | 1042..1174 | CDD:238333 | 53/202 (26%) | ||
DSRM | 1181..1252 | CDD:214634 | 16/85 (19%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |