| Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001102669.1 | Gene: | Ifih1 / 499801 | RGDID: | 1560496 | Length: | 1027 | Species: | Rattus norvegicus |
| Alignment Length: | 830 | Identity: | 183/830 - (22%) |
|---|---|---|---|
| Similarity: | 298/830 - (35%) | Gaps: | 241/830 - (29%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 5 EIKPRGYQLRLVD-HLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVE 68
Fly 69 LARQQAMAVRRCTNFKVGFY--VGEQGVDDWTRGMWSDEIKKNQVLVGTAQVF------LDMVTQ 125
Fly 126 TYVALSSLSVVIIDECHHGTGHHPFREFMRLF--------TIANQTK----LPRVVGLT-----G 173
Fly 174 VLIKGNE----ITNVATKLKELEI-TYRGNI--------------ITVSDTKEMENVMLYATKPT 219
Fly 220 EVMVSFPHQEQVLTVTRLISAEIEKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDF 284
Fly 285 LYQMKEYGIYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIR------HL------- 336
Fly 337 ---LVQKLQDMTYDDDDD----------NV-------NTEEVIMNF------------STPKVQ- 368
Fly 369 RFLMSLKVSFAD---KDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNV-LTPQFMVGRNN 429
Fly 430 ISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGR 494
Fly 495 ARTTEAKFVLFTAD----KERE-----------KTIQQIYQYRK---AHNDIAEYLKDRVLEKTE 541
Fly 542 PELYEIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIF 606
Fly 607 GVSA----KGKHVISINMPVNCMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVPKT 667
Fly 668 LKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYK--TECPLEFYD 715 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-2 | NP_523778.2 | MPH1 | 6..542 | CDD:224036 | 153/648 (24%) |
| DEXDc | 22..173 | CDD:238005 | 52/175 (30%) | ||
| Dicer_PBD | 241..343 | CDD:277191 | 19/117 (16%) | ||
| HELICc | <438..495 | CDD:197757 | 21/56 (38%) | ||
| Dicer_dimer | 572..665 | CDD:281376 | 14/96 (15%) | ||
| PAZ | 843..1004 | CDD:198017 | |||
| RIBOc | 1194..1391 | CDD:238333 | |||
| Rnc | 1433..1719 | CDD:223644 | |||
| RIBOc | 1448..1649 | CDD:238333 | |||
| dsrm | 1653..1717 | CDD:278464 | |||
| Ifih1 | NP_001102669.1 | DD | 8..99 | CDD:301326 | |
| DD | 111..201 | CDD:301326 | |||
| MPH1 | 305..875 | CDD:224036 | 149/635 (23%) | ||
| ResIII | 307..493 | CDD:282678 | 57/190 (30%) | ||
| MDA5_ID | 550..696 | CDD:277189 | 34/201 (17%) | ||
| Helicase_C | 710..825 | CDD:278689 | 28/120 (23%) | ||
| MDA5_C | 902..1016 | CDD:276945 | 27/153 (18%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 1.010 | |||||