| Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001382000.1 | Gene: | Ddx58 / 297989 | RGDID: | 1309460 | Length: | 926 | Species: | Rattus norvegicus |
| Alignment Length: | 810 | Identity: | 168/810 - (20%) |
|---|---|---|---|
| Similarity: | 307/810 - (37%) | Gaps: | 234/810 - (28%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 IKPRGYQLRLVDHLTK-SNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVEL 69
Fly 70 ARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE--IKKNQVLVGTAQVFLDMVTQTYV-ALS 131
Fly 132 SLSVVIIDECHHGTGHHPFREFMRLFTI----ANQTKLPRVVGLTGVLIKGNEITNVATKLKELE 192
Fly 193 ITYRGNIITVSDTKEMENVMLY---------ATKPTEVMVSFPHQEQVLTVTRLISAEIEKFYVS 248
Fly 249 LDLMNIGVQPIRRSKSLQC-----LRDPSK--KSFVKQLFNDFLYQMKEYGIYAAS---IAIISL 303
Fly 304 IVEFDIKRRQAETLSVKLM---------HRTALTLCE------KIRHL--LVQKLQDMTYDDDDD 351
Fly 352 NVNTE-----EVIMNFS------TPKVQRFLMSLKVSFADK-DPKDICCLVFVERRYTCKCIYGL 404
Fly 405 LLNYIQSTPELRNVLTPQFMVGRNNISPDFESVLERKWQKSAIQQFR-DGNANLMICSSVLEEGI 468
Fly 469 DVQACNHVFILDPVKTFNMYVQSKGRARTTEAKFVLFTADK---EREKTIQQIYQYRKAHNDIAE 530
Fly 531 YLKDRVLEKTEPELY---EIKGHFQDDIDPFTNENGAVLLPNNALAILHRYCQTIPTDAFGFVIP 592
Fly 593 WFHVLQEDERDRIFGVSAKGKHVISINMPVNCMLRDTIYS-DPMDNVKTAKISAAFKACKVLYSL 656
Fly 657 GELNERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDR-TYKTECPLEFYDALPRV 720
Fly 721 GEICYAYEIFLEPQFESCEYTEHMYLNLQT 750 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-2 | NP_523778.2 | MPH1 | 6..542 | CDD:224036 | 136/595 (23%) |
| DEXDc | 22..173 | CDD:238005 | 45/157 (29%) | ||
| Dicer_PBD | 241..343 | CDD:277191 | 19/128 (15%) | ||
| HELICc | <438..495 | CDD:197757 | 19/57 (33%) | ||
| Dicer_dimer | 572..665 | CDD:281376 | 10/93 (11%) | ||
| PAZ | 843..1004 | CDD:198017 | |||
| RIBOc | 1194..1391 | CDD:238333 | |||
| Rnc | 1433..1719 | CDD:223644 | |||
| RIBOc | 1448..1649 | CDD:238333 | |||
| dsrm | 1653..1717 | CDD:278464 | |||
| Ddx58 | NP_001382000.1 | CARD_RIG-I_r1 | 2..92 | CDD:260075 | |
| CARD_RIG-I_r2 | 100..186 | CDD:260076 | |||
| MPH1 | 242..784 | CDD:224036 | 142/653 (22%) | ||
| DEXHc_RIG-I_DDX58 | 242..443 | CDD:350831 | 61/231 (26%) | ||
| RIG-I_C | 806..919 | CDD:276943 | 19/112 (17%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.010 | |||||