Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_588215.2 | Gene: | dcr1 / 2538930 | PomBaseID: | SPCC188.13c | Length: | 1374 | Species: | Schizosaccharomyces pombe |
Alignment Length: | 1810 | Identity: | 374/1810 - (20%) |
---|---|---|---|
Similarity: | 658/1810 - (36%) | Gaps: | 591/1810 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 RGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPI---ESG---GKRALFMCNTV 67
Fly 68 ELARQQAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDEIKKNQVLVGTAQVFLDMVTQTYVALSS 132
Fly 133 LSVVIIDECHHGTGHHPFREFMRLFTIANQTK---------LPRVVGLTGVLIKGNEITNVATKL 188
Fly 189 KELEITYRGNIITVSDTK-------EMENVMLYATK----PTEVMVSFPHQEQVLTVTRLISAEI 242
Fly 243 EKFYVSLDLMNIGVQPIRRSKSLQCLRDPSKKSFVKQLFNDFLYQMKEYGIYAASIAIISLIVEF 307
Fly 308 -DIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNV---NTEEVIMNFSTPKVQ 368
Fly 369 RFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLLNYIQSTPELRNVLTPQFMVGRNNISPD 433
Fly 434 FESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFILDPVKTFNMYVQSKGRARTT 498
Fly 499 EAKFVLFTADKEREKTIQQIYQYRKAHNDIAEYLKDRVLEKTEPELY-----EIKGHFQDDIDPF 558
Fly 559 TNENGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHVLQEDERDRIFGVSAKGKHVISINMPVN 623
Fly 624 CMLRDTIYSDPMDNVKTAKISAAFKACKVLYSLGELNERFVPKTLKERVASIADVHFEHWNKYGD 688
Fly 689 SVTATVNKADKSKDRTYKTECPLEFYDALPRVGEICYAYEIFLE-PQ-----FESCEYTEHMYLN 747
Fly 748 LQTPRNYAILLRNKLPRLAEMPLFSNQGKLHVRVANAPLEVIIQNSEQLELLHQFHGMVFRDILK 812
Fly 813 IWHPF-----FVLDR----RSK------ENSYLVVPLILGAGEQKCFDWELMTNFRRLPQSHGSN 862
Fly 863 VQQREQQPAPRPEDFEGKIVTQWYANYDKPMLVTKVHRELTPLSYMEK-NQQDKTYYEFTMSKYG 926
Fly 927 NRIGDVVHKDKFMIEVRDLTEQLTF--YVHNRGKFNAKSKAKMKVILIPELCFNFNFPGDLWLKL 989
Fly 990 IFLPSILNRMYFLLHAEALRKRFNTYLN-LHLLPFNGTDYMPRPLEIDYSLKRNVDPLGNVIPTE 1053
Fly 1054 DIEEPKSLLEPMPTKSIEASVANLEITEFENPWQKYMEPVDLSRNLLSTYPVELDYYYHF----S 1114
Fly 1115 VGNVCEMNEMDFEDKEYWAKNQFHMPTGNIYGNRTPAKTNANVPALMPSKPTVRGKVKPLLILQK 1179
Fly 1180 TVSKEHITPAEQGEFLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTLTEVK 1244
Fly 1245 SKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPPGISLPHNVLALWRENPEFAKIIGPHNLRD 1309
Fly 1310 LALGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVGLVTIPNKVIADTLEALL 1374
Fly 1375 GVIVKNYGLQHAFKMLEYFKICRADIDKPLTQLLNLELGGKKMRANVNTTEIDGFL-INHY---- 1434
Fly 1435 ---------YLEKNLGYTFKDRRYLLQALTHPSYPTNR-ITGSYQELEFIGDAILDFLISAYIFE 1489
Fly 1490 NNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIISKFVNFQESQGHRVTNYV 1554
Fly 1555 RILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPPKGEFNMSTNVDVPKALGDVLEAL 1619
Fly 1620 IAAVYLDCRDLQRTWEVIFNLFEPELQEFTR---KVPINH-IRQLVEHKHAKPVFSSPIVEGETV 1680
Fly 1681 MVSCQFTCMEKTI--------KVYGF-----------GSNKDQAKLSAAKHALQQ 1716 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-2 | NP_523778.2 | MPH1 | 6..542 | CDD:224036 | 135/562 (24%) |
DEXDc | 22..173 | CDD:238005 | 48/165 (29%) | ||
Dicer_PBD | 241..343 | CDD:277191 | 11/102 (11%) | ||
HELICc | <438..495 | CDD:197757 | 23/56 (41%) | ||
Dicer_dimer | 572..665 | CDD:281376 | 18/92 (20%) | ||
PAZ | 843..1004 | CDD:198017 | 29/163 (18%) | ||
RIBOc | 1194..1391 | CDD:238333 | 51/196 (26%) | ||
Rnc | 1433..1719 | CDD:223644 | 77/321 (24%) | ||
RIBOc | 1448..1649 | CDD:238333 | 52/201 (26%) | ||
dsrm | 1653..1717 | CDD:278464 | 16/84 (19%) | ||
dcr1 | NP_588215.2 | MPH1 | 1..501 | CDD:224036 | 135/560 (24%) |
DEXDc | 26..188 | CDD:238005 | 49/167 (29%) | ||
Helicase_C | 343..464 | CDD:278689 | 40/129 (31%) | ||
Dicer_dimer | 538..620 | CDD:281376 | 18/92 (20%) | ||
RIBOc | 912..1045 | CDD:197778 | 51/272 (19%) | ||
Rnc | 1076..1345 | CDD:223644 | 76/315 (24%) | ||
RIBOc | 1098..1247 | CDD:238333 | 50/194 (26%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 69 | 1.000 | Domainoid score | I2712 |
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 299 | 1.000 | Inparanoid score | I607 |
OMA | 1 | 1.010 | - | - | QHG57860 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002051 | |
OrthoInspector | 1 | 1.000 | - | - | otm47000 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101152 | |
Panther | 1 | 1.100 | - | - | O | PTHR14950 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1728 | |
TreeFam | 1 | 0.960 | - | - | ||
12 | 11.830 |