Sequence 1: | NP_523778.2 | Gene: | Dcr-2 / 36993 | FlyBaseID: | FBgn0034246 | Length: | 1722 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_498761.2 | Gene: | dcr-1 / 176138 | WormBaseID: | WBGene00000939 | Length: | 1910 | Species: | Caenorhabditis elegans |
Alignment Length: | 2078 | Identity: | 517/2078 - (24%) |
---|---|---|---|
Similarity: | 861/2078 - (41%) | Gaps: | 556/2078 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 8 PRGYQLRLVDHLTKSNGIVYLPTGSGKTFVAILVLKRFSQDFDKPIESGGKRALFMCNTVELARQ 72
Fly 73 QAMAVRRCTNFKVGFYVGEQGVDDWTRGMWSDE------IKKNQVLVGTAQVFLDMVTQTYVALS 131
Fly 132 SLSVVIIDECHHGTG-HHPFREFMRLFTIANQTK-LPRVVGLTGVLIKGNEI-TNVATKLKELEI 193
Fly 194 TYRGNIITVSDTKEMENVMLYATKPTEVMV----------SFPHQEQVLTV----TRLISAEIEK 244
Fly 245 FYVSLDLMNIGVQPIRRS-----------------KSLQCLRDPSKKSFVKQLFND----FLYQM 288
Fly 289 KEYGIYAASIAIISLIVEFDIKRRQAETLSVKLMHRTALTLCEKIRHLLVQKLQDMTYDDDDDNV 353
Fly 354 NTEEVIMNFSTPKVQRFLMSLKVSFADKDPKDICCLVFVERRYTCKCIYGLLL--NYIQSTPELR 416
Fly 417 NVLTPQFMV---GRNNISPDFESVLERKWQKSAIQQFRDGNANLMICSSVLEEGIDVQACNHVFI 478
Fly 479 LDPVKTFNMYVQSKGRARTTEAKFVLFTADKERE------KTIQQI-----YQYRKAHNDIAEYL 532
Fly 533 KDRVLEKTEPELYEIKGHFQDDIDPFTNE-NGAVLLPNNALAILHRYCQTIPTDAFGFVIPWFHV 596
Fly 597 LQEDERDRIFGVSAKGKHVISINMPVNCMLRDTI-YSDPMDNVKTAKISAAFKACKVLYSLGELN 660
Fly 661 ERFVPKTLKERVASIADVHFEHWNKYGDSVTATVNKADKSKDRTYKTECPLEFYDALPRVGEICY 725
Fly 726 AYEIFLEPQFESCEYTEHMYLN-----LQTPRNY----AILLRNKLPRLAEMPLFSNQGKLHVRV 781
Fly 782 ANAPLEVIIQNSEQLELLHQFHGMVFRDILKIWHP----------------FFVLDRRSKENSYL 830
Fly 831 VVPLILGAGEQKCFDWELMTNFRRLPQSHGSNVQQREQQPAPRPEDFEGKIVTQWYANYDKPML- 894
Fly 895 -VTKVHRELTPLSYMEKNQQDKTYYEFTMSKYGNRIGDVVHKDKFMIEV---------------- 942
Fly 943 -----RDLTEQLTFYVHNRGKFNAKSK------AKMKVILIPELCFNFNFPGDLWLKLIFLPSIL 996
Fly 997 NRMYFLLHAEALRKR-------------------------------------------------- 1011
Fly 1012 -------------------FNTYL--------------------------------NLH------ 1019
Fly 1020 ---LLPFNGTDYMPRPLEIDYSLKRNVDPLG------NVIPT--EDIEEPKSLLEPMPTK----- 1068
Fly 1069 ---SIEASVANL--------------------------EITEFENPWQKYMEPVDLSRNLLSTYP 1104
Fly 1105 VELDYYYHFSVGNVCEMNEMDFEDKEYWAKNQFHMPTGNI--YGNRTPAKTNANVPALMPSKPTV 1167
Fly 1168 RGKVKPLLI-------LQKTVSKEHITPAEQGE-------------------------------- 1193
Fly 1194 ------------------FLAAITASSAADVFDMERLEILGDSFLKLSATLYLASKYSDWNEGTL 1240
Fly 1241 TEVKSKLVSNRNLLFCLIDADIPKTLNTIQFTPRYTWLPP------GISLPHNVLALWRENPEFA 1299
Fly 1300 KIIG-------PHNLRDLALGDEESLVKGNCSDINYNRFVEGCRANGQSFYAGADFSSEVNFCVG 1357
Fly 1358 LVT---IPNKVIADTLEALLGVIVKNYGLQHAFKMLEYF------KICRADIDKPLTQLLNLELG 1413
Fly 1414 GKKMRANVNTTEIDGFLINHY------YLEKNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELE 1472
Fly 1473 FIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENAKLSEIIS 1537
Fly 1538 KFV------NFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHANKCISQEAEKGVPP 1596
Fly 1597 KGEFNMSTNVDVPKALGDVLEALIAAVYLDC-RDLQRTWEVIFNLFEPELQEFTRKVPINHIRQL 1660
Fly 1661 VEHKHAKPVFS--SPIVEGETVMVSCQFTCMEKTIKVYGFGSNKDQAKLSAAKHALQQLSKCD 1721 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Dcr-2 | NP_523778.2 | MPH1 | 6..542 | CDD:224036 | 172/593 (29%) |
DEXDc | 22..173 | CDD:238005 | 62/158 (39%) | ||
Dicer_PBD | 241..343 | CDD:277191 | 22/122 (18%) | ||
HELICc | <438..495 | CDD:197757 | 23/56 (41%) | ||
Dicer_dimer | 572..665 | CDD:281376 | 28/93 (30%) | ||
PAZ | 843..1004 | CDD:198017 | 40/189 (21%) | ||
RIBOc | 1194..1391 | CDD:238333 | 67/212 (32%) | ||
Rnc | 1433..1719 | CDD:223644 | 103/300 (34%) | ||
RIBOc | 1448..1649 | CDD:238333 | 73/207 (35%) | ||
dsrm | 1653..1717 | CDD:278464 | 22/65 (34%) | ||
dcr-1 | NP_498761.2 | DEXDc | 27..183 | CDD:238005 | 63/160 (39%) |
Dicer_PBD | 248..343 | CDD:277191 | 18/103 (17%) | ||
HELICc | <434..498 | CDD:197757 | 27/65 (42%) | ||
Dicer_dimer | 572..659 | CDD:281376 | 28/93 (30%) | ||
PAZ_dicer_like | 836..956 | CDD:239209 | 26/135 (19%) | ||
RIBOc | 1395..1520 | CDD:197778 | 42/125 (34%) | ||
Rnc | 1639..1900 | CDD:223644 | 103/302 (34%) | ||
RIBOc | 1659..1824 | CDD:238333 | 73/203 (36%) | ||
DSRM | 1834..1894 | CDD:238007 | 21/62 (34%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 111 | 1.000 | Domainoid score | I3938 |
eggNOG | 1 | 0.900 | - | - | E1_COG0571 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S5945 |
OMA | 1 | 1.010 | - | - | QHG57860 | |
OrthoDB | 1 | 1.010 | - | - | D126291at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0002051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_101152 | |
Panther | 1 | 1.100 | - | - | O | PTHR14950 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1728 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
11 | 10.780 |