Protein Alignment Rab4 and VPS21

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_014732.1
• Gene: VPS21 / 854256
• SGDID: S000005615
• Length: 210
• Species: Saccharomyces cerevisiae
• Alignment Length: 171
• Identity: 73/171 - (42%)
• Similarity: 101/171 - (59%)
• Gaps: 5/171 - (2%)

  Fly    10 KFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQERFRSVT 74
            |.:::|.|..|||.::..|:.:.|.::...|||..|.::.|.:...:||.:||||||||||.|:.
Yeast     9 KLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLA 73

  Fly    75 RSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKD-LEEA--RDVTFLEA 136
            ..|||.|..||:|||.|...||....:|:.:....||.:|:|.|||||.| |:|.  |.|...|.
Yeast    74 PMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEG 138

  Fly   137 STFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGE 177
            ...|:|..|:|.||||||||||.:.||...:.|  .::|.|
Yeast   139 EKLAEEKGLLFFETSAKTGENVNDVFLGIGEKI--PLKTAE 177

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	70/161 (43%)
VPS21	NP_014732.1	Rab5_related	7..172	CDD:206653	71/164 (43%)