Protein Alignment Rab4 and YPT1

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_116615.1
• Gene: YPT1 / 850505
• SGDID: S000001856
• Length: 206
• Species: Saccharomyces cerevisiae
• Alignment Length: 200
• Identity: 91/200 - (45%)
• Similarity: 129/200 - (64%)
• Gaps: 4/200 - (2%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |:..||||||.|:||::|.||||||..|.:..:.:|...||||:|..:.|.:.||:|||||||||
Yeast     1 MNSEYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTA 65

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            ||||||::|.|||||:.|.::|||.|.::|||.:..||.:....|:..::.||||||.||::.|.
Yeast    66 GQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRV 130

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTI---LAKIETGELDPERIGSG-IQYGG 191
            |.:..|..||..|::.||||||....|||:|||..::.|   :::....|...::...| :...|
Yeast   131 VEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNETTQKKEDKGNVNLKG 195

  Fly   192 AALRN 196
            .:|.|
Yeast   196 QSLTN 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	80/159 (50%)
YPT1	NP_116615.1	Rab1_Ypt1	7..172	CDD:206661	83/164 (51%)