Protein Alignment Rab4 and RABA6a

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_177505.1
• Gene: RABA6a / 843698
• AraportID: AT1G73640
• Length: 233
• Species: Arabidopsis thaliana
• Alignment Length: 195
• Identity: 98/195 - (50%)
• Similarity: 127/195 - (65%)
• Gaps: 10/195 - (5%)

  Fly     3 ETY----DYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
            :||    |||||.::||.:..|||.||..|.:.:|:.||..||||||..|.|:||.|.:|.||||
plant     4 DTYEEECDYLFKAVLIGDSAVGKSNLLSRFSKDEFRFDSKPTIGVEFAYRNVHVGDKIIKAQIWD 68

  Fly    64 TAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEA 128
            ||||||||::|.||||||.||||:||.|.|.:|:.:..||.:.|..|:|..|::|||||.||.::
plant    69 TAGQERFRAITSSYYRGALGALLIYDITRRTTFDNIKKWLFELRDFANPETVVVLVGNKSDLRQS 133

  Fly   129 RDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAA 193
            |:|...|..|.|:...|.||||||....|||||||    .::.:|.  |:..:||.|..:..|||
plant   134 REVEEDEGKTLAESEGLYFLETSALENVNVEEAFL----VMIGRIH--EVVTQRIASENKSNGAA 192

  Fly   194  193
            plant   193  192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	85/159 (53%)
RABA6a	NP_177505.1	Rab11_like	11..175	CDD:206660	88/167 (53%)