Protein Alignment Rab4 and RABA3

DIOPT Version :9

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_171628.2
• Gene: RABA3 / 839493
• AraportID: AT1G01200
• Length: 237
• Species: Arabidopsis thaliana
• Alignment Length: 224
• Identity: 92/224 - (41%)
• Similarity: 129/224 - (57%)
• Gaps: 20/224 - (8%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |.|..||:||.::||.:..||:.||..|..::|..||..||||||.:|.:.:.||.||.||||||
plant    21 MPEKIDYVFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTA 85

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEA-R 129
            ||||:|:||.:|||||.||::|||.|.|.||:.:..|:.:.|..|..:.||:|||||.||... |
plant    86 GQERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHADDSAVIMLVGNKADLSVGKR 150

  Fly   130 DVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI------------ETGELDPER 182
            .|...:|..||:...|.|.|.||.:|.||:|||.:..:.|.:::            .|.:||..|
plant   151 AVPTEDAVEFAETQRLFFSEVSALSGGNVDEAFFRLLEEIFSRVVVSRKAMESDGGATVKLDGSR 215

  Fly   183 IGSGIQYGGAALRNLQTRQRSINKPDCTC 211
            |.   ...|:.|.....::::    .|:|
plant   216 ID---VISGSDLETSNIKEQA----SCSC 237

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	78/160 (49%)
RABA3	NP_171628.2	Rab11_like	26..191	CDD:206660	80/164 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910