DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab4 and RAB11c

DIOPT Version :9

Sequence 1:	NP_523777.1	Gene:	Rab4 / 36992	FlyBaseID:	FBgn0016701	Length:	213	Species:	Drosophila melanogaster
Sequence 2:	NP_172434.1	Gene:	RAB11c / 837490	AraportID:	AT1G09630	Length:	217	Species:	Arabidopsis thaliana

Alignment Length:	214	Identity:	95/214 - (44%)
Similarity:	134/214 - (62%)	Gaps:	11/214 - (5%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            |.||||||.::||.:|.|||.||..|..::|..:|..||||||.:|.:.|.|::||.||||||||
plant     7 EEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||:|::|.:|||||.|||||||.|...:|..::.||.:.|..|..||||:|:|||.||:..|.|.
plant    72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVA 136

  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALRNL 197
            ..:|.::|::..|.|:||||....|||:||    :|||:::.. .:..:.|.|......|.::..
plant   137 TEDAQSYAEKEGLSFIETSALEALNVEKAF----QTILSEVYR-IISKKSISSDQTTANANIKEG 196

  Fly   198 Q------TRQRSINKPDCT 210
            |      |.:.:..||.|:
plant   197 QTIDVAATSESNAKKPCCS 215

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	79/159 (50%)
RAB11c	NP_172434.1	PLN03110	1..216	CDD:178657	95/214 (44%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910