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Protein Alignment Rab4 and RABA4a
DIOPT Version :9
Sequence 1: | NP_523777.1 |
Gene: | Rab4 / 36992 |
FlyBaseID: | FBgn0016701 |
Length: | 213 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_201330.1 |
Gene: | RABA4a / 836652 |
AraportID: | AT5G65270 |
Length: | 226 |
Species: | Arabidopsis thaliana |
Alignment Length: | 172 |
Identity: | 85/172 - (49%) |
Similarity: | 113/172 - (65%) |
Gaps: | 4/172 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 SETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAG 66
|:..||:||.::||.:..|||.:|..:...:|..||..||||||.:|.:.:..||||.|||||||
plant 11 SQKIDYVFKVVLIGDSAVGKSQILARYARDEFSLDSKATIGVEFQTRTLVIDHKSVKAQIWDTAG 75
Fly 67 QERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDV 131
|||:|:||.:|||||.||:||||.|.|.:|:.:..||.:.|..|..||||:|:|||.||.:.|.:
plant 76 QERYRAVTSAYYRGAVGAMLVYDITRRQTFDHIPRWLEELRAHADKNIVIILIGNKSDLVDQRAI 140
Fly 132 TFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI 173
...:|..||::..|.||||||....|||.|| .|:|.:|
plant 141 PTEDAKEFAEKEGLFFLETSAFNATNVESAF----STVLTEI 178
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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