Protein Alignment Rab4 and RAB1A

DIOPT Version :10

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_568678.1
• Gene: RAB1A / 834766
• AraportID: AT5G47200
• Length: 202
• Species: Arabidopsis thaliana
• Alignment Length: 211
• Identity: 97/211 - (45%)
• Similarity: 125/211 - (59%)
• Gaps: 11/211 - (5%)

  Fly     1 MSETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTA 65
            |:..||||||.|:||.:|.||||||..|.:..:.|....||||:|..|.|...||::||||||||
plant     1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 65

  Fly    66 GQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARD 130
            ||||||::|.||||||.|.::.||.|..:|||.:..|||:....||.|:..||||||.||...:.
plant    66 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQWLNEIDRYASENVNKLLVGNKNDLTSQKV 130

  Fly   131 VTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIGSGIQYGGAALR 195
            |:...|..||.|..:.|||||||...||||||:..:..|..::.:   .|.        |||...
plant   131 VSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMAS---QPA--------GGAKPP 184

  Fly   196 NLQTRQRSINKPDCTC 211
            .:|.|.:.:|:....|
plant   185 TVQIRGQPVNQQSGCC 200

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	83/159 (52%)
RAB1A	NP_568678.1	Rab1_Ypt1	7..172	CDD:206661	86/164 (52%)