Protein Alignment Rab4 and RABA1d

DIOPT Version :9

• Sequence 1: NP_523777.1
• Gene: Rab4 / 36992
• FlyBaseID: FBgn0016701
• Length: 213
• Species: Drosophila melanogaster
• Sequence 2: NP_193615.1
• Gene: RABA1d / 827614
• AraportID: AT4G18800
• Length: 214
• Species: Arabidopsis thaliana
• Alignment Length: 184
• Identity: 88/184 - (47%)
• Similarity: 113/184 - (61%)
• Gaps: 13/184 - (7%)

  Fly     3 ETYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWDTAGQ 67
            :.||||||.::||.:|.|||.||..|..::|..:|..||||||.:|.:||..|.:|.||||||||
plant     8 DDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72

  Fly    68 ERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKKDLEEARDVT 132
            ||:|::|.:|||||.|||||||.|...:|..:..||.:.|....||||::|||||.||.....|.
plant    73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSDLRHLVAVQ 137

  Fly   133 FLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKI---------ETGE 177
            ..:|.:||:...|.|:||||....|||.||    ..:|.:|         |.||
plant   138 TEDAKSFAENESLYFMETSALESTNVENAF----SEVLTQIYHVVSKKAMEAGE 187

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab4	NP_523777.1	Rab4	9..169	CDD:206696	79/159 (50%)
RABA1d	NP_193615.1	Rab11_like	11..175	CDD:206660	83/167 (50%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910